RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 SYN1P17600 705 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 LAG3P18627 525 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 PCSK1P29120 753 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 SLC11A1P49279 550 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 HTRA4P83105 476 aaPredicted RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 BTG3Q14201 252 aaPredicted RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 PAN2Q504Q3 1202 aaKnown RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 ZNF394Q53GI3 561 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 SGO2Q562F6 1265 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 WSCD1Q658N2 575 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 ALKBH5Q6P6C2 394 aaKnown RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 CD300LGQ6UXG3 332 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■■□□□ 13.8
SIK3-209ENST00000480222 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 ACP6Q9NPH0 428 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 MARCH5Q9NX47 278 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 REXO2Q9Y3B8 237 aaKnown RBP13.39□□□□□ -0.27
SIK3-209ENST00000480222 CEP83Q9Y592 693 aa13.39□□□□□ -0.27
SIK3-209ENST00000480222 ZNF263O14978 683 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 TADA2AO75478 443 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
SIK3-209ENST00000480222 ITGB1P05556 798 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 GALTP07902 379 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CHRNB2P17787 502 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
SIK3-209ENST00000480222 PPM1AP35813 382 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
SIK3-209ENST00000480222 BRCC3P46736 316 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
SIK3-209ENST00000480222 EPHB4P54760 987 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 BCAR1P56945 870 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CENPCQ03188 943 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CCDC122Q5T0U0 273 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 ARHGAP17Q68EM7 881 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
SIK3-209ENST00000480222 OSTM1Q86WC4 334 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CRYBG2Q8N1P7 616 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 HASPINQ8TF76 798 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 RABGGTAQ92696 567 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 CWH43Q9H720 699 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.38□□□□□ -0.27
SIK3-209ENST00000480222 PCDHA13Q9Y5I0 950 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 SLC4A7Q9Y6M7 1214 aa13.38□□□□□ -0.27
SIK3-209ENST00000480222 O00370 1275 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 PJA2O43164 708 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 CDH5P33151 784 aaPredicted RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 NSFP46459 744 aaKnown RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 CYP27A1Q02318 531 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 KIF5AQ12840 1032 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 CLEC16AQ2KHT3 1053 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 RASIP1Q5U651 963 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 THEM5Q8N1Q8 247 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 TFAP2BQ92481 460 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 SYT15Q9BQS2 421 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
SIK3-209ENST00000480222 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 NME7Q9Y5B8 376 aa13.37□□□□□ -0.27
SIK3-209ENST00000480222 F8W810 466 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 I3L4J1 428 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 KRT86O43790 486 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ZNF500O60304 480 aaPredicted RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 RTN2O75298 545 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 OAZ2O95190 189 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 SETSIPP0DME0 302 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 ATP2A2P16615 1042 aaKnown RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 NOMO3P69849 1222 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ORC1Q13415 861 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 CNGA2Q16280 664 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 SPOUT1Q5T280 376 aaKnown RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 KCNT2Q6UVM3 1135 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms