RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TOPORSQ9NS56 1045 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KRT82Q9NSB4 513 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 BLOC1S4Q9NUP1 217 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SLC38A7Q9NVC3 462 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 KBTBD4Q9NVX7 518 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SPG21Q9NZD8 308 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 CGNQ9P2M7 1197 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PRKAG3Q9UGI9 489 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 DPP7Q9UHL4 492 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 PIN4Q9Y237 131 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 FAM50BQ9Y247 325 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 GINS2Q9Y248 185 aa5.37□□□□□ -1.55
PTCD3-213ENST00000480102 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
PTCD3-213ENST00000480102 SPTBN5Q9NRC6 3674 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PVALEFA0A1B0GWK0 134 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 A0A1W2PQ27 194 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 A0A1W2PQ64 194 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 A0A1W2PQD8 194 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 VPS37CA5D8V6 355 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM150BA6NC51 233 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PRR19A6NJB7 356 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 INO80B-WBP1J3KQ70 363 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ABLIM1O14639 778 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 SPTLC2O15270 562 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TMPRSS2O15393 492 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 USO1O60763 962 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CUTAO60888 179 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 HIP1RO75146 1068 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 FGF18O76093 207 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ALDH2P05091 517 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 SRGAP2CP0DJJ0 459 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 LIG1P18858 919 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 RAB6AP20340 208 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 MRPS5P82675 430 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CREMQ03060 361 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ENPEPQ07075 957 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ELAVL2Q12926 359 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 GPM6BQ13491 265 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PRPF4BQ13523 1007 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CAMK1Q14012 370 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 NFKBIBQ15653 356 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 LEXMQ3ZCV2 418 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ARSHQ5FYA8 562 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CLLU1OSQ5K130 101 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ATF7IP2Q5U623 682 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 SLFN12LQ6IEE8 588 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 FOXR2Q6PJQ5 311 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ALKAL1Q6UXT8 129 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 DYMQ7RTS9 669 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 KCNK18Q7Z418 384 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 DDX53Q86TM3 631 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PPFIBP1Q86W92 1011 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 NT5DC4Q86YG4 428 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 KSR1Q8IVT5 923 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CD302Q8IX05 232 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 SLC39A11Q8N1S5 342 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 EFHBQ8N7U6 833 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 MRPL43Q8N983 215 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 IQUBQ8NA54 791 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 GSTCDQ8NEC7 633 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 DEPTORQ8TB45 409 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 URGCPQ8TCY9 931 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 STK35Q8TDR2 534 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ARNTL2Q8WYA1 636 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 MRRFQ96E11 262 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 WDR89Q96FK6 387 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 IGSF21Q96ID5 467 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 MFSD14AQ96MC6 490 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ZNF558Q96NG5 402 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 NECAB3Q96P71 396 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ACO2Q99798 780 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 C17orf80Q9BSJ5 609 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 SEMA6CQ9H3T2 930 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 ACSS3Q9H6R3 686 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 RXFP1Q9HBX9 757 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TLR9Q9NR96 1032 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CHST7Q9NS84 486 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TYW1Q9NV66 732 aaKnown RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TBC1D13Q9NVG8 400 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 TBC1D7Q9P0N9 293 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 KIAA1522Q9P206 1035 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-213ENST00000480102 THEGQ9P2T0 379 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 FAM8A1Q9UBU6 413 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 DERAQ9Y315 318 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 IPPQ9Y573 584 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PCDHGC5Q9Y5F6 944 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 CLIC4Q9Y696 253 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 MYH6P13533 1939 aa5.36□□□□□ -1.55
PTCD3-213ENST00000480102 PRUNE2Q8WUY3 3088 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TTC28Q96AY4 2481 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 UBE4BO95155 1302 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ARL5CA6NH57 179 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 EPOPA6NHQ4 379 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 LRRIQ4A6NIV6 560 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TBKBP1A7MCY6 615 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms