RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 KIAA0391O15091 583 aaKnown RBP15.43■□□□□ 0.06
ATG4B-218ENST00000479554 LAMTOR5O43504 91 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 TMEM191BP0C7N4 346 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-218ENST00000479554 ATF6P18850 670 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 GABRR2P28476 465 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 TSPY1Q01534 308 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 BFSP1Q12934 665 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 TAF12Q16514 161 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 FOXD4L6Q3SYB3 417 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-218ENST00000479554 ARHGAP15Q53QZ3 475 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 STXBP5Q5T5C0 1151 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 SHC4Q6S5L8 630 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 FOXD4L3Q6VB84 417 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-218ENST00000479554 YAF2Q8IY57 180 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 CSGALNACT2Q8N6G5 542 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 GLIS3Q8NEA6 775 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 KCNG4Q8TDN1 519 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 MTMR12Q9C0I1 747 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 SEMA4AQ9H3S1 761 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 TRPV5Q9NQA5 729 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 TICRRQ7Z2Z1 1910 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 HUS1O60921 280 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 F13A1P00488 732 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 KRT19P08727 400 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 GPR158Q5T848 1215 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 GAREM2Q75VX8 874 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 LRRTM3Q86VH5 581 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-218ENST00000479554 ADSSL1Q8N142 457 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 CLDN23Q96B33 292 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 ANKRD36BP1Q96IX9 119 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 FAM84AQ96KN4 292 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 MKNK1Q9BUB5 465 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 MAGEF1Q9HAY2 307 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 PDE11AQ9HCR9 933 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 FBXO4Q9UKT5 387 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 NDRG2Q9UN36 371 aaKnown RBP15.42■□□□□ 0.06
ATG4B-218ENST00000479554 L1RE1Q9UN81 338 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
ATG4B-218ENST00000479554 PCDHB5Q9Y5E4 795 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 PIAS3Q9Y6X2 628 aa15.42■□□□□ 0.06
ATG4B-218ENST00000479554 DPYSL4O14531 572 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 EIF3DO15371 548 aaKnown RBP eCLIP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 LMNAP02545 664 aaKnown RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 CDC25CP30307 473 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 RPS9P46781 194 aaKnown RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 RBP5P82980 135 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 CYP4F8P98187 520 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 FAM26FQ5R3K3 315 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 LMBRD2Q68DH5 695 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 MAML2Q8IZL2 1156 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 TMEM86AQ8N2M4 240 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 CSGALNACT1Q8TDX6 532 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 GIPC2Q8TF65 315 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 RSPRY1Q96DX4 576 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 DDX43Q9NXZ2 648 aaKnown RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 SNX9Q9Y5X1 595 aa15.41■□□□□ 0.06
ATG4B-218ENST00000479554 NUP210Q8TEM1 1887 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 SHISA7A6NL88 538 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ARNTLO00327 626 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 CHADO15335 359 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 POLR2DO15514 142 aaKnown RBP15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ME1P48163 572 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 MYL7Q01449 175 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 FCHO2Q0JRZ9 810 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 SURF1Q15526 300 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 NFE2Q16621 373 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF528Q3MIS6 628 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 GPIHBP1Q8IV16 184 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 LEO1Q8WVC0 666 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-218ENST00000479554 FAM3CQ92520 227 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 MSANTD3Q96H12 275 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ACBD6Q9BR61 282 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 TASP1Q9H6P5 420 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 TMLHEQ9NVH6 421 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 INTS13Q9NVM9 706 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF292O60281 2723 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 UBE4BO95155 1302 aa15.4■□□□□ 0.06
ATG4B-218ENST00000479554 PRPF40AO75400 957 aaKnown RBP15.39■□□□□ 0.05
ATG4B-218ENST00000479554 TNNC2P02585 160 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 ACAT1P24752 427 aaKnown RBP15.39■□□□□ 0.05
ATG4B-218ENST00000479554 HOXD13P35453 343 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 CSTF1Q05048 431 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms