RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 F13A1P00488 732 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 GARTP22102 1010 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 CSTF1Q05048 431 aaKnown RBP18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 ARID3BQ8IVW6 561 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 SNX21Q969T3 373 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 TRIM9Q9C026 710 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 MAGED2Q9UNF1 606 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 FAM186AA6NE01 2351 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 PTPRDP23468 1912 aa18.73■□□□□ 0.59
ECHDC1-216ENST00000479525 POLR2DO15514 142 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 LAMTOR5O43504 91 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 PPP6R2O75170 966 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 MICAL2O94851 1124 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 TMEM191BP0C7N4 346 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 ZSCAN22P10073 491 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 AFMP43652 599 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 FZD5Q13467 585 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 THEM5Q8N1Q8 247 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 GPD1LQ8N335 351 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 CXorf38Q8TB03 319 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 OXCT2Q9BYC2 517 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 IL21Q9HBE4 155 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 KBTBD4Q9NVX7 518 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 DDX43Q9NXZ2 648 aaKnown RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 DSEQ9UL01 958 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 MAFFQ9ULX9 164 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 SNX9Q9Y5X1 595 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 PIAS3Q9Y6X2 628 aa18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 MORC2Q9Y6X9 1032 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 PTPRZ1P23471 2315 aaPredicted RBP18.72■□□□□ 0.59
ECHDC1-216ENST00000479525 ZNF263O14978 683 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 CUTAO60888 179 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 HAPLN1P10915 354 aaPredicted RBP18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 CCNE1P24864 410 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 HOXC13P31276 330 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 CYP2J2P51589 502 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 DNM1Q05193 864 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 ZNF852Q6ZMS4 543 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 MFSD6LQ8IWD5 586 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 YAF2Q8IY57 180 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 DCLK2Q8N568 766 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 LEMD2Q8NC56 503 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 TTC16Q8NEE8 873 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 ELMO3Q96BJ8 720 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 RBM12Q9NTZ6 932 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 HSPBP1Q9NZL4 362 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 RIF1Q5UIP0 2472 aaKnown RBP18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 F5P12259 2224 aa18.71■□□□□ 0.59
ECHDC1-216ENST00000479525 ATP2C2O75185 946 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 YEATS4O95619 227 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 LDHAP00338 332 aaKnown RBP18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 CYP2F1P24903 491 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 ME1P48163 572 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 TNK2Q07912 1038 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 CUL4BQ13620 913 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 TAF12Q16514 161 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 DDR2Q16832 855 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 FAM3CQ92520 227 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 DNASE1L2Q92874 299 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 IRF7Q92985 503 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 TMEM206Q9H813 350 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 SLC39A2Q9NP94 309 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 GTSE1Q9NYZ3 720 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
ECHDC1-216ENST00000479525 ARNTLO00327 626 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 HUS1O60921 280 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 PSMC1P62191 440 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 MTAPQ13126 283 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 ALCAMQ13740 583 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 VEPH1Q14D04 833 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 WDR44Q5JSH3 913 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 FAM26FQ5R3K3 315 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 TXNDC11Q6PKC3 985 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 CACTINQ8WUQ7 758 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 DEPDC1BQ8WUY9 529 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 TRPV4Q9HBA0 871 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 PCDHB5Q9Y5E4 795 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 DMXL1Q9Y485 3027 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 HELZP42694 1942 aaKnown RBP18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 DCHS1Q96JQ0 3298 aa18.69■□□□□ 0.58
ECHDC1-216ENST00000479525 DPYSL4O14531 572 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 TGFB1I1O43294 461 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 LMNAP02545 664 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 DLATP10515 647 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 TUFMP49411 452 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 TSPY1Q01534 308 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 TMEM150AQ86TG1 271 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ITIH5Q86UX2 942 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 NT5DC4Q86YG4 428 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 DCP1BQ8IZD4 617 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ADGRF2Q8IZF7 708 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ZNF687Q8N1G0 1237 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 MAB21L3Q8N8X9 362 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 IQUBQ8NA54 791 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 RIN3Q8TB24 985 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms