RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 KCNK5O95279 499 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 PRAMEF12O95522 483 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZNF806P0C7X5 589 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 PLA2G4BP0C869 781 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 MCF2P10911 925 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 PLS3P13797 630 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 SPINK2P20155 84 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 SCP2P22307 547 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 GUCY2CP25092 1073 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 CDC25AP30304 524 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ELF1P32519 619 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 CTHP32929 405 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 CNR2P34972 360 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 LONP1P36776 959 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 GRM5P41594 1212 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 MLLT6P55198 1093 aaPredicted RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 OSTNP61366 133 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 NUCB2P80303 420 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 TNK2Q07912 1038 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 RAD51AP2Q09MP3 1159 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 DHX8Q14562 1220 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 PON2Q15165 354 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ECM1Q16610 540 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 KYAT1Q16773 422 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZSCAN23Q3MJ62 389 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 AASDHQ4L235 1098 aaPredicted RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 IL31Q6EBC2 164 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 TAS1R3Q7RTX0 852 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 SYT2Q8N9I0 419 aaPredicted RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 BEST2Q8NFU1 509 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 LSM14BQ9BX40 385 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 TSPYL1Q9H0U9 437 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 CDT1Q9H211 546 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZHX3Q9H4I2 956 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 PTPRHQ9HD43 1115 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 GTSE1Q9NYZ3 720 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZMIZ1Q9ULJ6 1067 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 YIPF1Q9Y548 306 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 A0A1W2PRU2 124 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 OTOL1A6NHN0 477 aaPredicted RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 SFI1A8K8P3 1242 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 H7C4K7 107 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 SYN3O14994 580 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 TRIM66O15016 1216 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 CHADO15335 359 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 CLDN3O15551 220 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 OR4Q2P0C623 313 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 FECHP22830 423 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 RPL9P32969 192 aaKnown RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 LIG4P49917 911 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 PPP2R5DQ14738 602 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 SYCP1Q15431 976 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 CTXN3Q4LDR2 81 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 HYIQ5T013 277 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 CYP4A22Q5TCH4 519 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 TPGS2Q68CL5 300 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 NAIF1Q69YI7 327 aaPredicted RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 PSAPL1Q6NUJ1 521 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 LRSAM1Q6UWE0 723 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 C1orf186Q6ZWK4 172 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 CEP68Q76N32 757 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 GPBP1Q86WP2 473 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 ARID3BQ8IVW6 561 aaPredicted RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 MYCT1Q8N699 235 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 RIN3Q8TB24 985 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 SPIRE2Q8WWL2 714 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 GAB3Q8WWW8 586 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 DDX1Q92499 740 aaKnown RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 SUSD3Q96L08 255 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 RUSC1Q9BVN2 902 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 TARS2Q9BW92 718 aaKnown RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 RBSNQ9H1K0 784 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 ASAH2Q9NR71 780 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 ANKFY1Q9P2R3 1169 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 AFF4Q9UHB7 1163 aaKnown RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 ODF2LQ9ULJ1 636 aa7.21□□□□□ -1.26
VCP-205ENST00000479300 NUP210Q8TEM1 1887 aaPredicted RBP7.21□□□□□ -1.26
VCP-205ENST00000479300 CITO14578 2027 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 K7ENM7 598 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 TOM1L1O75674 476 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 RPP40O75818 363 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 SOAT2O75908 522 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 CLTAP09496 248 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 KCNE1P15382 129 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 PROZP22891 400 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 KPNA1P52294 538 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 CBX1P83916 185 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 PPP2R3AQ06190 1150 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 LRRC32Q14392 662 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 NOLC1Q14978 699 aaKnown RBP eCLIP7.2□□□□□ -1.26
VCP-205ENST00000479300 SF3A1Q15459 793 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 IL17AQ16552 155 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 DGKKQ5KSL6 1271 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 FSTL4Q6MZW2 842 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms