RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 NXPE3Q969Y0 559 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CCDC51Q96ER9 411 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CPB2Q96IY4 423 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 MFSD14AQ96MC6 490 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CITED4Q96RK1 184 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 ERGIC2Q96RQ1 377 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 FAM213AQ9BRX8 229 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 KIAA1586Q9HCI6 787 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 KCNK4Q9NYG8 393 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 PDCD11Q14690 1871 aaKnown RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 ITIH6Q6UXX5 1313 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 A0A1B0GUA9 196 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 A0A1W2PP55 124 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ZNF233A6NK53 670 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 LRRIQ3A6PVS8 624 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 PES1O00541 588 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 LDHAP00338 332 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 CD4P01730 458 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 AFPP02771 609 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 GHRP10912 638 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 CKBP12277 381 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 AXLP30530 894 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TNFSF9P41273 254 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ACOT2P49753 483 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 VAMP7P51809 220 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 DLG4P78352 724 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 MYL7Q01449 175 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 UBXN1Q04323 297 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TBX2Q13207 712 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 LPIN1Q14693 890 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 PSMD6Q15008 389 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 SYCP1Q15431 976 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 FBXO47Q5MNV8 452 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 FKBP15Q5T1M5 1219 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TCERG1LQ5VWI1 586 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 SPECC1LQ69YQ0 1117 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 NOTUMQ6P988 496 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 SLC27A1Q6PCB7 646 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ANKRD33Q7Z3H0 272 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 CDR2LQ86X02 465 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 GALNT12Q8IXK2 581 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TMEM102Q8N9M5 508 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 SPC24Q8NBT2 197 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 CAGE1Q8TC20 777 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 PARD3BQ8TEW8 1205 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TCHPQ9BT92 498 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 OSBPL7Q9BZF2 842 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 MCOLN1Q9GZU1 580 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ADAM19Q9H013 955 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 ERVK-5Q9HDB9 667 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TOPORSQ9NS56 1045 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 RBAKQ9NYW8 714 aaPredicted RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 CPSF3Q9UKF6 684 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 PIN4Q9Y237 131 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 SIK3Q9Y2K2 1263 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
USP48-208ENST00000479177 TRIP11Q15643 1979 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 MROH7Q68CQ1 1323 aa7.2□□□□□ -1.26
USP48-208ENST00000479177 TET1Q8NFU7 2136 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 GTPBP10A4D1E9 387 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 RBAK-RBAKDNI3L0D1 243 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 PMM2O15305 246 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 TLR3O15455 904 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 MEFVO15553 781 aaPredicted RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 PQBP1O60828 265 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 N4BP1O75113 896 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 CPNE3O75131 537 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 RPS6KA5O75582 802 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 ALX3O95076 343 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 NPTXRO95502 500 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CLTAP09496 248 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CXCL8P10145 99 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CAPN2P17655 700 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CD52P31358 61 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 FMO5P49326 533 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 KLK7P49862 253 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 MXI1P50539 228 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 POU5F1Q01860 360 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 PPP3CAQ08209 521 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 BFSP2Q13515 415 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 TRIM14Q14142 442 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 ENOX2Q16206 610 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 KYAT1Q16773 422 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 TRIM60Q495X7 471 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CBWD6Q4V339 395 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 SEZ6Q53EL9 994 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CBWD3Q5JTY5 395 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CBWD5Q5RIA9 395 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 UBXN11Q5T124 520 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 SLC39A5Q6ZMH5 540 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 APBB1IPQ7Z5R6 666 aaPredicted RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 DRC7Q8IY82 874 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 TMEM192Q8IY95 271 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 THNSL1Q8IYQ7 743 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CCDC127Q96BQ5 260 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms