RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 KBTBD7Q8WVZ9 684 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 FUBP3Q96I24 572 aaKnown RBP eCLIP16.58■□□□□ 0.24
C9orf3-217ENST00000479161 FAM84AQ96KN4 292 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 CEP295NLQ96MC4 621 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 PIDD1Q9HB75 910 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 CYP4F11Q9HBI6 524 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 DDX43Q9NXZ2 648 aaKnown RBP16.58■□□□□ 0.24
C9orf3-217ENST00000479161 ARMCX3Q9UH62 379 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-217ENST00000479161 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 CLUHO75153 1309 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 BIN1O00499 593 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 VNN2O95498 520 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 LRG1P02750 347 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 EPHA5P54756 1037 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 ARPP19P56211 112 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 ZNF699Q32M78 642 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 ZNF667Q5HYK9 610 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 INTS6LQ5JSJ4 861 aaKnown RBP16.57■□□□□ 0.24
C9orf3-217ENST00000479161 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-217ENST00000479161 APOL5Q9BWW9 433 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 IMPG2Q9BZV3 1241 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 DACH1Q9UI36 760 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 PTPRDP23468 1912 aa16.57■□□□□ 0.24
C9orf3-217ENST00000479161 P4HA2O15460 535 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 HLA-DRAP01903 254 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 PTPN2P17706 415 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 ERCC5P28715 1186 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-217ENST00000479161 DUSP4Q13115 394 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 LRRTM3Q86VH5 581 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 TTC39CQ8N584 583 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 NXPE3Q969Y0 559 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 SLC35C1Q96A29 364 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 NECAB3Q96P71 396 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-217ENST00000479161 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 CYP3A43Q9HB55 503 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 CD320Q9NPF0 282 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 EPS15L1Q9UBC2 864 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 PCDHB5Q9Y5E4 795 aa16.56■□□□□ 0.24
C9orf3-217ENST00000479161 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-217ENST00000479161 ZNF197O14709 1029 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 GNL1P36915 607 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-217ENST00000479161 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 GCLMP48507 274 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 MXI1P50539 228 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 NLRP12P59046 1061 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 SLC39A12Q504Y0 691 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 KLHL10Q6JEL2 608 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 UNC93AQ86WB7 457 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 OSTM1Q86WC4 334 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 TDRD5Q8NAT2 981 aaKnown RBP16.55■□□□□ 0.24
C9orf3-217ENST00000479161 ATAD1Q8NBU5 361 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 CCDC150Q8NCX0 1101 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 ZNF512Q96ME7 567 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-217ENST00000479161 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 BCO2Q9BYV7 579 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 YIPF1Q9Y548 306 aa16.55■□□□□ 0.24
C9orf3-217ENST00000479161 CCL16O15467 120 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
C9orf3-217ENST00000479161 FGF19O95750 216 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 WEE2P0C1S8 567 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 OR4Q2P0C623 313 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 TRIM49P0CI25 452 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 TRIM49CP0CI26 452 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 HAPLN1P10915 354 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-217ENST00000479161 ALADP13716 330 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-217ENST00000479161 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 MAGEA11P43364 429 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 EPHB3P54753 998 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 C4orf50Q6ZRC1 276 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 GRASPQ7Z6J2 395 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-217ENST00000479161 ITIH5Q86UX2 942 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 TRIM59Q8IWR1 403 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 TAS1R2Q8TE23 839 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 EEF2KMTQ96G04 330 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 RPGRIP1Q96KN7 1286 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 DNMT3BQ9UBC3 853 aaKnown RBP16.54■□□□□ 0.24
C9orf3-217ENST00000479161 CDH22Q9UJ99 828 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
C9orf3-217ENST00000479161 C2CD4DB7Z1M9 353 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 FSHRP23945 695 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 LMO2P25791 158 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 TWF1Q12792 350 aa16.53■□□□□ 0.24
C9orf3-217ENST00000479161 PABPC1LQ4VXU2 614 aaKnown RBP16.53■□□□□ 0.24
C9orf3-217ENST00000479161 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms