RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TMED10P49755 219 aaKnown RBP22.3■■□□□ 1.16
SDF4-206ENST00000478938 CCNIQ14094 377 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 DNAL1Q4LDG9 190 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 CASP10Q92851 521 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 AGPAT1Q99943 283 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 HEPHQ9BQS7 1158 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 C6orf50Q9HD87 102 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 KCNQ5Q9NR82 932 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 CD48P09326 243 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 GPC5P78333 572 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 MECOMQ03112 1051 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 C6orf183Q5T699 404 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 PSPC1Q8WXF1 523 aaKnown RBP22.3■■□□□ 1.16
SDF4-206ENST00000478938 CNBD2Q96M20 576 aa22.3■■□□□ 1.16
SDF4-206ENST00000478938 CICQ96RK0 1608 aaPredicted RBP22.3■■□□□ 1.16
SDF4-206ENST00000478938 FUOMA2VDF0 154 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 POTECB2RU33 542 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 NR3C1P04150 777 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 PLA2G4BP0C869 781 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 TRIM28Q13263 835 aaKnown RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 EFTUD2Q15029 972 aaKnown RBP eCLIP22.29■■□□□ 1.163e-6■□□□□ 10.7
SDF4-206ENST00000478938 CLPPQ16740 277 aaPredicted RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 NSMFQ6X4W1 530 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 KYAT3Q6YP21 454 aaKnown RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 BTBD9Q96Q07 612 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 CCT7Q99832 543 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 TAGLN3Q9UI15 199 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 KIAA1024Q9UPX6 916 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 INPP5FQ9Y2H2 1132 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 COQ6Q9Y2Z9 468 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 MROH5Q6ZUA9 1318 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 EDIL3O43854 480 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 RAG1P15918 1043 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 BGNP21810 368 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 SERPINB6P35237 376 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 KNOP1Q1ED39 458 aaKnown RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 PRPF39Q86UA1 669 aaKnown RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 RELL1Q8IUW5 271 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 CCDC124Q96CT7 223 aaKnown RBP22.29■■□□□ 1.16
SDF4-206ENST00000478938 VPS50Q96JG6 964 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 DCLK3Q9C098 648 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 ZNHIT2Q9UHR6 403 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 MYH11P35749 1972 aa22.29■■□□□ 1.16
SDF4-206ENST00000478938 UBAP1LF5GYI3 381 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 DNAJA2O60884 412 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 CLCN2P51788 898 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 PDIA2Q13087 525 aaKnown RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 FAM91A1Q658Y4 838 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 SYDE1Q6ZW31 735 aaPredicted RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 REXO1Q8N1G1 1221 aaKnown RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 COX4I2Q96KJ9 171 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 IKZF4Q9H2S9 585 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 TRPV5Q9NQA5 729 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 DTNAQ9Y4J8 743 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 A0A1B0GTW7 788 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 ZBED1O96006 694 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 EPHB1P54762 984 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 TFAP4Q01664 338 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 TMEM214Q6NUQ4 689 aaKnown RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 POTEHQ6S545 545 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 MXD3Q9BW11 206 aa22.28■■□□□ 1.16
SDF4-206ENST00000478938 TUBA8Q9NY65 449 aaPredicted RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 PSMC3IPQ9P2W1 217 aaPredicted RBP22.28■■□□□ 1.16
SDF4-206ENST00000478938 FOXN3O00409 490 aaPredicted RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 C6orf222P0C671 652 aaPredicted RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 RBP3P10745 1247 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 ACADVLP49748 655 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 SLC25A3Q00325 362 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 HIC1Q14526 733 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 PRKD1Q15139 912 aaPredicted RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 HSF5Q4G112 596 aaPredicted RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 ERI1Q8IV48 349 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 GRK7Q8WTQ7 553 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 TEKT1Q969V4 418 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 CRNKL1Q9BZJ0 848 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 TRPC7Q9HCX4 862 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 RRN3Q9NYV6 651 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 STAMBPO95630 424 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 RPL26P61254 145 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 SPIDRQ14159 915 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 SMUG1Q53HV7 270 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 AMIGO2Q86SJ2 522 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 SLC7A5P1Q8MH63 180 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 ZCCHC9Q8N567 271 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 EIF2AQ9BY44 585 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 VPS11Q9H270 941 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 RSL24D1Q9UHA3 163 aaKnown RBP22.27■■□□□ 1.16
SDF4-206ENST00000478938 BCS1LQ9Y276 419 aa22.27■■□□□ 1.16
SDF4-206ENST00000478938 ARAP2Q8WZ64 1704 aa22.27■■□□□ 1.15
SDF4-206ENST00000478938 POTEB3A0JP26 581 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 GNA11P29992 359 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 STIP1P31948 543 aaKnown RBP22.26■■□□□ 1.15
SDF4-206ENST00000478938 APOFQ13790 326 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 RABGAP1LQ5R372 815 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 BORAQ6PGQ7 559 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms