RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CNOT6LQ96LI5 555 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 RIPOR3Q96MK2 946 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 UHRF1Q96T88 793 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 MRPL45Q9BRJ2 306 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 OXCT2Q9BYC2 517 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 SNX25Q9H3E2 840 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 POMKQ9H5K3 350 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 METTL14Q9HCE5 456 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ZDHHC7Q9NXF8 308 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ABI2Q9NYB9 513 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 MTMR11A4FU01 709 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 LRRN2O75325 713 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ZMYND10O75800 440 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SOAT2O75908 522 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 VNN2O95498 520 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ASS1P00966 412 aaKnown RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 LRG1P02750 347 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 PDGFRBP09619 1106 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 CCDC192P0DO97 292 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 P4HA1P13674 534 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 LMO2P25791 158 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 PCSK1P29120 753 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 GTF2H1P32780 548 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 MTHFRP42898 656 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 LHX1P48742 406 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 CDH8P55286 799 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ENPEPQ07075 957 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 DUSP4Q13115 394 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 STX1AQ16623 288 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SGSM1Q2NKQ1 1148 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ATAT1Q5SQI0 421 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 C11orf57Q6ZUT1 292 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 GPR149Q86SP6 731 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 TCEAL8Q8IYN2 117 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 DCP1BQ8IZD4 617 aaKnown RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ATAD1Q8NBU5 361 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 FBXL13Q8NEE6 735 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 HDAC7Q8WUI4 952 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SUSD6Q92537 303 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SEMA4DQ92854 862 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF707Q96C28 371 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 RPGRIP1Q96KN7 1286 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 MED15Q96RN5 788 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SEPT5Q99719 369 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SYT15Q9BQS2 421 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ZCWPW1Q9H0M4 648 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 AFF4Q9UHB7 1163 aaKnown RBP7.38□□□□□ -1.23
BRCA1-215ENST00000478531 SLC27A5Q9Y2P5 690 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 INSL5Q9Y5Q6 135 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 MYO10Q9HD67 2058 aa7.38□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF638Q14966 1978 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 XYLBO75191 536 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 STAU1O95793 577 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GNA14O95837 355 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 C1RP00736 705 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 CD58P19256 250 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 PTMSP20962 102 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 WARSP23381 471 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 SSTR3P32745 418 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GNL1P36915 607 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ASPAP45381 313 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MTIF2P46199 727 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 FMO5P49326 533 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TWF1Q12792 350 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GPR17Q13304 367 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ORC1Q13415 861 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 KLHL40Q2TBA0 621 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MGAT5BQ3V5L5 792 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 INTS6LQ5JSJ4 861 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 FOXR2Q6PJQ5 311 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 DPH6Q7L8W6 267 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GRASPQ7Z6J2 395 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ELMOD1Q8N336 334 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 CMASQ8NFW8 434 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TAF4BQ92750 862 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 NECTIN4Q96NY8 510 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ACBD6Q9BR61 282 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 RHOBTB2Q9BYZ6 727 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 NIF3L1Q9GZT8 377 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 DNAJC25Q9H1X3 360 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 DPEP3Q9H4B8 488 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 VRTNQ9H8Y1 702 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 APOBEC3GQ9HC16 384 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TMLHEQ9NVH6 421 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ANO10Q9NW15 660 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 HCFC1R1Q9NWW0 138 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 RAB20Q9NX57 234 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GTF3C4Q9UKN8 822 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 YIPF1Q9Y548 306 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 OBSL1O75147 1896 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MYO16Q9Y6X6 1858 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 CLUHO75153 1309 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GREB1Q4ZG55 1949 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 A8MXQ7 604 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GABRDO14764 452 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms