RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 L1RE1Q9UN81 338 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CYP3A7-CYP3A51PA0A087WV96 503 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 IRF6O14896 467 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CHN1P15882 459 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ITGB5P18084 799 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CYP3A7P24462 503 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 YWHAHQ04917 246 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 PTPN11Q06124 597 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 NSUN2Q08J23 767 aaKnown RBP eCLIP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 MGAT5BQ3V5L5 792 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ACCSLQ4AC99 568 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 PAN2Q504Q3 1202 aaKnown RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 FASTKD1Q53R41 847 aaKnown RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 EMC1Q8N766 993 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CCT8L2Q96SF2 557 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 DDIT4Q9NX09 232 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 EPHB2P29323 1055 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 PDK1Q15118 436 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CBWD6Q4V339 395 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CBWD3Q5JTY5 395 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CBWD5Q5RIA9 395 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 FBXO25Q8TCJ0 367 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ASIC4Q96FT7 647 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 KLF6Q99612 283 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ETNK1Q9HBU6 452 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 VCX3AQ9NNX9 186 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.034e-6■■■■■ 29.2
NPHP4-208ENST00000478423 H2AFXP16104 143 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ADORA2AP29274 412 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 NNMTP40261 264 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ATPAF2Q8N5M1 289 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CDC26Q8NHZ8 85 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 IL31RAQ8NI17 732 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF606Q8WXB4 792 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 SDCCAG3Q96C92 435 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 MMTAG2Q9BU76 263 aaKnown RBP14.88□□□□□ -0.03
NPHP4-208ENST00000478423 ABHD16BQ9H3Z7 469 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 INTS13Q9NVM9 706 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 SPECC1L-ADORA2AF8WAN1 911 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 H0Y3Z8 333 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 HSD17B3P37058 310 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 RAP1GAPP47736 663 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ZPBP2Q6X784 338 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 MAP4K3Q8IVH8 894 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ARHGEF19Q8IW93 802 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 DCP1BQ8IZD4 617 aaKnown RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF518BQ9C0D4 1074 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 CACYBPQ9HB71 228 aaKnown RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 CYP39A1Q9NYL5 469 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 SMG5Q9UPR3 1016 aaKnown RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 PSTPIP1O43586 416 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 PROSCO94903 275 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 BTNL9Q6UXG8 535 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 LRRC55Q6ZSA7 311 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF710Q8N1W2 664 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 EFHD1Q9BUP0 239 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 PSMC3IPQ9P2W1 217 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 M0QYT0 321 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 TBC1D12O60347 775 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 AP1G2O75843 785 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 TFRCP02786 760 aaKnown RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF200P98182 395 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 MEA1Q16626 185 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 FAXCQ5TGI0 409 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ABRAQ8N0Z2 381 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 FBXO41Q8TF61 875 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 ABI2Q9NYB9 513 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.87□□□□□ -0.03
NPHP4-208ENST00000478423 SIK3Q9Y2K2 1263 aa14.87□□□□□ -0.03
NPHP4-208ENST00000478423 NEMP1O14524 444 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 UBA1P22314 1058 aaKnown RBP14.86□□□□□ -0.03
NPHP4-208ENST00000478423 STIP1P31948 543 aaKnown RBP14.86□□□□□ -0.03
NPHP4-208ENST00000478423 MAGEA9P43362 315 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ACAD11Q709F0 780 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ACTRT1Q8TDG2 376 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 GANCQ8TET4 914 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 SERPINI1Q99574 410 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 TLR10Q9BXR5 811 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
NPHP4-208ENST00000478423 FAM96AQ9H5X1 160 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 PHF20L1A8MW92 1017 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ANKRD63C9JTQ0 380 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ACKR2O00590 384 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 SNX2O60749 519 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 GCNT1Q02742 428 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 GRAMD1AQ96CP6 724 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 TMEM120BA0PK00 339 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms