RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 ATAD1Q8NBU5 361 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 CCDC26Q8TAB7 109 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 USP13Q92995 863 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 CD101Q93033 1021 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 EXOC4Q96A65 974 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 CLMPQ9H6B4 373 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 ECT2Q9H8V3 914 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 SH3GLB2Q9NR46 395 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 SLC38A7Q9NVC3 462 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 MMP17Q9ULZ9 603 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 PCDHA4Q9UN74 947 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 APOBEC2Q9Y235 224 aaKnown RBP8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 NUB1Q9Y5A7 615 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 PCDHB9Q9Y5E1 797 aa8.02□□□□□ -1.13
SPTLC1-205ENST00000477888 A0A087WWV3 80 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 CAPN8A6NHC0 703 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 M0QZQ0 153 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 KCNE1P15382 129 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 ITPKBP27987 946 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 NLRP5P59047 1200 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 CFHR1Q03591 330 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 PDGFRLQ15198 375 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 NPY5RQ15761 445 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 DCAF4L1Q3SXM0 396 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 C2orf27AQ580R0 203 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 PPP4R3AQ6IN85 833 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 TMEM150AQ86TG1 271 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 MARCH9Q86YJ5 346 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 NAXDQ8IW45 347 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 ZBTB8OSQ8IWT0 167 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 TTC9BQ8N6N2 239 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 PIP4K2CQ8TBX8 421 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 OXCT2Q9BYC2 517 aaPredicted RBP8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 C2orf40Q9H1Z8 148 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 TDP1Q9NUW8 608 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 TOR4AQ9NXH8 423 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 ZMYM5Q9UJ78 669 aa8.01□□□□□ -1.13
SPTLC1-205ENST00000477888 MTMR11A4FU01 709 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 CAPN9O14815 690 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 MARCH6O60337 910 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 SOAT2O75908 522 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 ALDH1A2O94788 518 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 SYPP08247 313 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 MARCKSP29966 332 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 CDC25CP30307 473 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 MCM4P33991 863 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 AVPR1AP37288 418 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 GRM5P41594 1212 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 KCNC4Q03721 635 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 YWHAHQ04917 246 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 INF2Q27J81 1249 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 NT5DC1Q5TFE4 455 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 LMBRD2Q68DH5 695 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 NCAPH2Q6IBW4 605 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 CC2D1AQ6P1N0 951 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 MAEAQ7L5Y9 396 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 RABEPKQ7Z6M1 372 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 ITIH5Q86UX2 942 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 CCDC33Q8N5R6 958 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 MAB21L3Q8N8X9 362 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 CEP120Q8N960 986 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 WHAMMQ8TF30 809 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 BSNDQ8WZ55 320 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 C18orf25Q96B23 403 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 SPACA7Q96KW9 195 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 DCBLD2Q96PD2 775 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 EIF2AK1Q9BQI3 630 aaKnown RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 RNF26Q9BY78 433 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 TOPORSQ9NS56 1045 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 PCOLCE2Q9UKZ9 415 aa8□□□□□ -1.13
SPTLC1-205ENST00000477888 TIMM13Q9Y5L4 95 aaPredicted RBP8□□□□□ -1.13
SPTLC1-205ENST00000477888 PLXNB3Q9ULL4 1909 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 GON4LQ3T8J9 2241 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 OR6C75A6NL08 312 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 AP5Z1O43299 807 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 USO1O60763 962 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 LARGE1O95461 756 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 XRCC6P12956 609 aaKnown RBP eCLIP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 ATF6P18850 670 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 EIF2S3P41091 472 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 YARSP54577 528 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 SEC13P55735 322 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 AKAP17AQ02040 695 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 ZNF33AQ06730 810 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 BFSP1Q12934 665 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 BYSLQ13895 437 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 MYBPC2Q14324 1141 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 ZNF268Q14587 947 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 EML3Q32P44 896 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 ADCK5Q3MIX3 580 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 TSGA10IPQ3SY00 556 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 ATF7IP2Q5U623 682 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 TTC30AQ86WT1 665 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 BLIDQ8IZY5 108 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 CPA6Q8N4T0 437 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms