RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TMPRSS15P98073 1019 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 TMEM62Q0P6H9 643 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 RCN1Q15293 331 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 PPP2R5EQ16537 467 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 CCDC62Q6P9F0 684 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 RFWD3Q6PCD5 774 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 MCOLN2Q8IZK6 566 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 GRK7Q8WTQ7 553 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 CLEC4DQ8WXI8 215 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 TLCD1Q96CP7 247 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 PRR11Q96HE9 360 aaPredicted RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
CMC1-209ENST00000477739 RFX1P22670 979 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 SFNP31947 248 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 CCNHP51946 323 aaPredicted RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 DALRD3Q5D0E6 543 aaKnown RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 MROH9Q5TGP6 573 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 NCAPG2Q86XI2 1143 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 GPD1LQ8N335 351 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 ACTL9Q8TC94 416 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 SLC9A2Q9UBY0 812 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 MCM8Q9UJA3 840 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 C15orf41Q9Y2V0 281 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 PCDHA3Q9Y5H8 950 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 ZNF536O15090 1300 aa10.27□□□□□ -0.76
CMC1-209ENST00000477739 MAPK13O15264 365 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 ZMPSTE24O75844 475 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 SERPINB3P29508 390 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 MYL6P60660 151 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PSMC1P62191 440 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 IFRD2Q12894 506 aaPredicted RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 BIRC2Q13490 618 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PEX6Q13608 980 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 HIF1AQ16665 826 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 ANKRD22Q5VYY1 191 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 DCAF15Q66K64 600 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 OR6B2Q6IFH4 312 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 CES3Q6UWW8 571 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 ANO5Q75V66 913 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 NLRP9Q7RTR0 991 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 SLC7A3Q8WY07 619 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 CFAP57Q96MR6 1250 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PXMP2Q9NR77 195 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 FAM49BQ9NUQ9 324 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 UBIAD1Q9Y5Z9 338 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PRRC2BQ5JSZ5 2229 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 TBC1D12O60347 775 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 DKC1O60832 514 aaKnown RBP eCLIP10.27□□□□□ -0.77
CMC1-209ENST00000477739 MSX2P35548 267 aaPredicted RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 PEX5P50542 639 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 WDR4P57081 412 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 OTUD4Q01804 1114 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 NCOA4Q13772 614 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 KDELC2Q7Z4H8 507 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 FBXO36Q8NEA4 188 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 RFWD2Q8NHY2 731 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 TCP10LQ8TDR4 215 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 NSUN6Q8TEA1 469 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 PGM2Q96G03 612 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 GMLQ99445 158 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 MOV10L1Q9BXT6 1211 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 AAASQ9NRG9 546 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 HACL1Q9UJ83 578 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 AK5Q9Y6K8 562 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 C10orf71Q711Q0 1435 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 CES2O00748 559 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 DHX15O43143 795 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 LPXNO60711 386 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PSAPP07602 524 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 POU5F1Q01860 360 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 KRT81Q14533 505 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 DPY19L2P1Q6NXN4 242 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 CENPUQ71F23 418 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 SLC9A9Q8IVB4 645 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 ARID3BQ8IVW6 561 aaPredicted RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 THTPAQ9BU02 230 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 KIAA1586Q9HCI6 787 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 RAB6BQ9NRW1 208 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 PCMTD2Q9NV79 361 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 CNOT7Q9UIV1 285 aaKnown RBP10.27□□□□□ -0.77
CMC1-209ENST00000477739 POLIQ9UNA4 740 aa10.27□□□□□ -0.77
CMC1-209ENST00000477739 OPHN1O60890 802 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 KRT36O76013 467 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 USP1O94782 785 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 CST3P01034 146 aaPredicted RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 ITIH2P19823 946 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms