RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GIPC2Q8TF65 315 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 LMBR1Q8WVP7 490 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 ZNF689Q96CS4 500 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-207ENST00000477676 MSLNLQ96KJ4 702 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 YME1L1Q96TA2 773 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
CKS1B-207ENST00000477676 KATNAL1Q9BW62 490 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 IFIH1Q9BYX4 1025 aaKnown RBP5.29□□□□□ -1.56
CKS1B-207ENST00000477676 MAF1Q9H063 256 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 GBP3Q9H0R5 595 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 PCDH18Q9HCL0 1135 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 PRKAG3Q9UGI9 489 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 PNMA2Q9UL42 364 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 MRPL11Q9Y3B7 192 aaKnown RBP5.29□□□□□ -1.56
CKS1B-207ENST00000477676 CACNA1IQ9P0X4 2223 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 NCOR2Q9Y618 2525 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 CACNA1BQ00975 2339 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 OTOGLQ3ZCN5 2332 aa5.29□□□□□ -1.56
CKS1B-207ENST00000477676 EMSYQ7Z589 1322 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 FANCMQ8IYD8 2048 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 TRBV23OR9-2A0A075B6M9 112 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 C17orf102A2RUQ5 167 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 B4DLN1 442 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 KLRF2D3W0D1 207 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ENPP3O14638 875 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 FGF10O15520 208 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ATP9AO75110 1047 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 CSPG5O95196 566 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PARP1P09874 1014 aaKnown RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 GHRP10912 638 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PCP11498 1178 aaKnown RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 CD247P20963 164 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ICAM3P32942 547 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 CTNNB1P35222 781 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 BMPR1AP36894 532 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 GATMP50440 423 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 MRPL12P52815 198 aaKnown RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ADAM15Q13444 863 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 RTP2Q5QGT7 225 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 MARCH8Q5T0T0 291 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 EP400NLQ6ZTU2 488 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 MCF2L2Q86YR7 1114 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 FIBCD1Q8N539 461 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 VN1R2Q8NFZ6 395 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 SEPT8Q92599 483 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ALG3Q92685 438 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ESR2Q92731 530 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 SPATA32Q96LK8 384 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PTCHD1Q96NR3 888 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 INPP4AQ96PE3 977 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PIGSQ96S52 555 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 AMNQ9BXJ7 453 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 RIOX1Q9H6W3 641 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 AGO3Q9H9G7 860 aaKnown RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 GP6Q9HCN6 339 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 PCDHA1Q9Y5I3 950 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 MRPL42Q9Y6G3 142 aaKnown RBP5.28□□□□□ -1.56
CKS1B-207ENST00000477676 LAMA1P25391 3075 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 GPR179Q6PRD1 2367 aa5.28□□□□□ -1.56
CKS1B-207ENST00000477676 ADGRA3Q8IWK6 1321 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 GSTTP1A0A1W2PQM5 241 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 LOC730098B7Z3J9 87 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 H0Y8X5 98 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 ZNF213O14771 459 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 ZBTB5O15062 677 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 DGKIO75912 1065 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 EYA4O95677 639 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 MMP1P03956 469 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 ITGB1P05556 798 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 CD3EP07766 207 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 ARP10275 920 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 TGFB3P10600 412 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 TACR1P25103 407 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 CCND2P30279 289 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 ZNF76P36508 570 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 SEPHS1P49903 392 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 VCPP55072 806 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 RRP1P56182 461 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 PRR5P85299 388 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 TROAPQ12815 778 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 HDAC1Q13547 482 aaPredicted RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 COL9A2Q14055 689 aaPredicted RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 PTPROQ16827 1216 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 FBXO47Q5MNV8 452 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 UTP14CQ5TAP6 766 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 CRIP3Q6Q6R5 217 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 CWC27Q6UX04 472 aaKnown RBP5.27□□□□□ -1.57
CKS1B-207ENST00000477676 METTL7BQ6UX53 244 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 TICAM2Q86XR7 235 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 HOMER1Q86YM7 354 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 SPPL3Q8TCT6 385 aa5.27□□□□□ -1.57
CKS1B-207ENST00000477676 EDAQ92838 391 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms