RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 HS2ST1Q7LGA3 356 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 MFSD6LQ8IWD5 586 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 PDCL2Q8N4E4 241 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 TTC9BQ8N6N2 239 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 LRRC3Q9BY71 257 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 HEBP1Q9NRV9 189 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 HSPBP1Q9NZL4 362 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 UBE4BO95155 1302 aa16.91■□□□□ 0.3
CLDN11-204ENST00000477531 PVALEFA0A1B0GWK0 134 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 HEPACAM2A8MVW5 462 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 HAPLN1P10915 354 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 CD72P21854 359 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 CDC25CP30307 473 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 VIPR2P41587 438 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 AFMP43652 599 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 LHX1P48742 406 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 ZC3H14Q6PJT7 736 aaKnown RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 GLIS3Q8NEA6 775 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 GIPC2Q8TF65 315 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 FNBP1Q96RU3 617 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 LPIN3Q9BQK8 851 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 ZNF334Q9HCZ1 680 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 TRPV5Q9NQA5 729 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 INTS13Q9NVM9 706 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 SPATA6Q9NWH7 488 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 GDAP2Q9NXN4 497 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
CLDN11-204ENST00000477531 DLGAP2Q9P1A6 1054 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 TCHHQ07283 1943 aa16.9■□□□□ 0.3
CLDN11-204ENST00000477531 USP34Q70CQ2 3546 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 PTPRZ1P23471 2315 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 LAMTOR5O43504 91 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 PCSK1P29120 753 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 CDR1P51861 262 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 EPM2AIP1Q7L775 607 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 LRRTM3Q86VH5 581 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 ARID3BQ8IVW6 561 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 TOP6BLQ8N6T0 577 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
CLDN11-204ENST00000477531 ZMYM5Q9UJ78 669 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 L1RE1Q9UN81 338 aa16.89■□□□□ 0.29
CLDN11-204ENST00000477531 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 LRRN2O75325 713 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 TNNI1P19237 187 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 CYP2J2P51589 502 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 RPL10AP62906 217 aaKnown RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 PKP1Q13835 747 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 LMBRD2Q68DH5 695 aaPredicted RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 WDR49Q8IV35 697 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 HPDLQ96IR7 371 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 PI4K2AQ9BTU6 479 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 TASP1Q9H6P5 420 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 SLC39A2Q9NP94 309 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 AGPAT3Q9NRZ7 376 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 SIX4Q9UIU6 781 aa16.88■□□□□ 0.29
CLDN11-204ENST00000477531 MTF2Q9Y483 593 aaPredicted RBP16.88■□□□□ 0.29
CLDN11-204ENST00000477531 CLIC2O15247 247 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 CHADO15335 359 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 SLFN14P0C7P3 912 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 CSH1P0DML2 217 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 CSH2P0DML3 217 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 DLATP10515 647 aaKnown RBP16.87■□□□□ 0.29
CLDN11-204ENST00000477531 GLULP15104 373 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 ATF6P18850 670 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 HOXD13P35453 343 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 KRT85P78386 507 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 CUL4BQ13620 913 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
CLDN11-204ENST00000477531 STXBP5Q5T5C0 1151 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 ASCL5Q7RTU5 278 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 SPATA2LQ8IUW3 424 aaPredicted RBP16.87■□□□□ 0.29
CLDN11-204ENST00000477531 OR5B17Q8NGF7 314 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 LEO1Q8WVC0 666 aaPredicted RBP16.87■□□□□ 0.29
CLDN11-204ENST00000477531 FAM3CQ92520 227 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 MSANTD3Q96H12 275 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms