RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 RIOX2Q8IUF8 465 aa22.22■■□□□ 1.15
LIMS2-214ENST00000476932 RIBC1Q8N443 379 aaPredicted RBP22.22■■□□□ 1.15
LIMS2-214ENST00000476932 HAUS1Q96CS2 278 aa22.22■■□□□ 1.15
LIMS2-214ENST00000476932 TPX2Q9ULW0 747 aaKnown RBP22.22■■□□□ 1.15
LIMS2-214ENST00000476932 SNCAIPQ9Y6H5 919 aa22.22■■□□□ 1.15
LIMS2-214ENST00000476932 SRCAPQ6ZRS2 3230 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 UBOX5O94941 541 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 EIF4BP23588 611 aaKnown RBP22.21■■□□□ 1.15
LIMS2-214ENST00000476932 ADCY1Q08828 1119 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 GPS1Q13098 491 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 PRKG1Q13976 671 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 PIGHQ14442 188 aaPredicted RBP22.21■■□□□ 1.15
LIMS2-214ENST00000476932 NEDD9Q14511 834 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 TMED2Q15363 201 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 DUOXA2Q1HG44 320 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 FAM133BQ5BKY9 247 aaKnown RBP22.21■■□□□ 1.15
LIMS2-214ENST00000476932 RNASEH2BQ5TBB1 312 aaKnown RBP22.21■■□□□ 1.15
LIMS2-214ENST00000476932 METTL7BQ6UX53 244 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 CEP128Q6ZU80 1094 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 TRIM50Q86XT4 487 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 SEPT1Q8WYJ6 367 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.21■■□□□ 1.15
LIMS2-214ENST00000476932 MCM3APO60318 1980 aa22.21■■□□□ 1.15
LIMS2-214ENST00000476932 MGRN1O60291 552 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 SRGAP2CP0DJJ0 459 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 PROZP22891 400 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 ELF3P78545 371 aaPredicted RBP22.2■■□□□ 1.15
LIMS2-214ENST00000476932 TAP1Q03518 808 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 GALNTL6Q49A17 601 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 IER5Q5VY09 327 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 LRRC71Q8N4P6 559 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 MAGEB18Q96M61 343 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 CFAP57Q96MR6 1250 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 TGS1Q96RS0 853 aaKnown RBP22.2■■□□□ 1.15
LIMS2-214ENST00000476932 CCDC77Q9BR77 488 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 R3HDMLQ9H3Y0 253 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 TJP2Q9UDY2 1190 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 PRKAG3Q9UGI9 489 aa22.2■■□□□ 1.15
LIMS2-214ENST00000476932 LRRD1A4D1F6 860 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 CHUKO15111 745 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 ARIH2O95376 493 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 MARK3P27448 753 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 MORF4L2Q15014 288 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 ZKSCAN8Q15776 578 aaPredicted RBP22.2■■□□□ 1.14
LIMS2-214ENST00000476932 LY6KQ17RY6 165 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 PTPN20Q4JDL3 420 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 DENND1BQ6P3S1 775 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 TRABD2AQ86V40 505 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 ERICH1Q86X53 443 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 ARFGAP1Q8N6T3 406 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 RNF149Q8NC42 400 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 SLC35B2Q8TB61 432 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 CYTH4Q9UIA0 394 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 GGT7Q9UJ14 662 aa22.2■■□□□ 1.14
LIMS2-214ENST00000476932 IGKV6-21A0A0C4DH24 114 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 EXOC1LA0A1B0GW35 172 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 RASA4BC9J798 803 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 RASA4O43374 803 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 ITGAVP06756 1048 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 FOXN2P32314 431 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 STX2P32856 288 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 PSMC4P43686 418 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 WDR4P57081 412 aaKnown RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 SLC25A11Q02978 314 aaKnown RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 SNCBQ16143 134 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 ZNF699Q32M78 642 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 ARHGEF18Q6ZSZ5 1173 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 EEPD1Q7L9B9 569 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 SPATA21Q7Z572 469 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 TDRPQ86YL5 185 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 PTPRHQ9HD43 1115 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 DDX56Q9NY93 547 aaKnown RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 EVPLQ92817 2033 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 USP2O75604 605 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 SUN1O94901 812 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 TAC1P20366 129 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 HIRAP54198 1017 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 TFAMQ00059 246 aaKnown RBP22.19■■□□□ 1.14
LIMS2-214ENST00000476932 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 FAM167AQ96KS9 214 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 TTC25Q96NG3 672 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 TMEM121Q9BTD3 319 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 PCDH9Q9HC56 1237 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 PPME1Q9Y570 386 aa22.19■■□□□ 1.14
LIMS2-214ENST00000476932 RFC1P35251 1148 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-214ENST00000476932 NCALDP61601 193 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 MKRN3Q13064 507 aaKnown RBP22.18■■□□□ 1.14
LIMS2-214ENST00000476932 TRPC3Q13507 836 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 VGLL4Q14135 290 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 MAPK6Q16659 721 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 HP1BP3Q5SSJ5 553 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-214ENST00000476932 POLNQ7Z5Q5 900 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 CEP120Q8N960 986 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 JOSD2Q8TAC2 188 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 PRCCQ92733 491 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-214ENST00000476932 NKIRAS1Q9NYS0 192 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 POLIQ9UNA4 740 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 PPP2R3BQ9Y5P8 575 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 TGFB3P10600 412 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 IL1R2P27930 398 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms