RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 B4E171 279 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 F6X3S4 739 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 MYO1FO00160 1098 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ATXN7O15265 892 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 MEFVO15553 781 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 EYA4O95677 639 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CALM1P0DP23 149 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CALM2P0DP24 149 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CALM3P0DP25 149 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PYGMP11217 842 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HOXA11P31270 313 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC26A3P40879 764 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SULT2A1Q06520 285 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 GOLGA8FQ08AF8 430 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 GOLGA8DPQ0D2H9 430 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 TBL3Q12788 808 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HNRNPDQ14103 355 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CASP8Q14790 479 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PFKFB3Q16875 520 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 TCTE1Q5JU00 501 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 TRIM65Q6PJ69 517 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SGMS1Q86VZ5 419 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 NLRP8Q86W28 1048 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PALM2Q8IXS6 379 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 AVL9Q8NBF6 648 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ST13P5Q8NFI4 369 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 WDR60Q8WVS4 1066 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 GATA6Q92908 595 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 EXOC2Q96KP1 924 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZDHHC15Q96MV8 337 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 HGH1Q9BTY7 390 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 STN1Q9H668 368 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CYP26B1Q9NR63 512 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ZFP57Q9NU63 452 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 GRHPRQ9UBQ7 328 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 CHORDC1Q9UHD1 332 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 DNAJC16Q9Y2G8 782 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
SPTLC3-205ENST00000476791 ARAP1Q96P48 1450 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 FRMPD2Q68DX3 1309 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 HEATR9A2RTY3 570 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 CDC14CA4D256 554 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 SH3D21A4FU49 640 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 SPECC1L-ADORA2AF8WAN1 911 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 IFIT3O14879 490 aaKnown RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 PLGP00747 810 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 IL2RAP01589 272 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 COL6A2P12110 1019 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 C6P13671 934 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 MYL6BP14649 208 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 RAG1P15918 1043 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 TRHRP34981 398 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 KCNJ5P48544 419 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 HABP2Q14520 560 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 UBE3CQ15386 1083 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 WHAMMP3Q1A5X7 153 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 AKAP4Q5JQC9 854 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 CEP85LQ5SZL2 805 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 METTL21CQ5VZV1 264 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 C8orf74Q6P047 294 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 OR7G1Q8NGA0 311 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 GPRASP2Q96D09 838 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 SPZ1Q9BXG8 430 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF518BQ9C0D4 1074 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 KLHL4Q9C0H6 718 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 PDE7BQ9NP56 450 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 USP40Q9NVE5 1235 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 ASIC3Q9UHC3 531 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 CHIC2Q9UKJ5 165 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 APOBEC2Q9Y235 224 aaKnown RBP6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 PTCH2Q9Y6C5 1203 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 MROH5Q6ZUA9 1318 aa6.29□□□□□ -1.4
SPTLC3-205ENST00000476791 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PSMD9O00233 223 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PPEF2O14830 753 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 XPO1O14980 1071 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CLPTM1O96005 669 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FYNP06241 537 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 H2AFXP16104 143 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ATF6P18850 670 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 COPB1P53618 953 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 USP14P54578 494 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SPAG1Q07617 926 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 POU4F2Q12837 409 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SEPT6Q14141 434 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SQLEQ14534 574 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SPCS2Q15005 226 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FOXR2Q6PJQ5 311 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SPATC1Q76KD6 591 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms