RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 TTI2Q6NXR4 508 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 GET4Q7L5D6 327 aaPredicted RBP16.11■□□□□ 0.17
DFFA-203ENST00000476658 LRRTM3Q86VH5 581 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 RNF135Q8IUD6 432 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 ELMOD1Q8N336 334 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 KBTBD7Q8WVZ9 684 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 ELMO3Q96BJ8 720 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 ACSF2Q96CM8 615 aaPredicted RBP16.11■□□□□ 0.17
DFFA-203ENST00000476658 DUSP9Q99956 384 aaKnown RBP16.11■□□□□ 0.17
DFFA-203ENST00000476658 ACBD6Q9BR61 282 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 CRISPLD1Q9H336 500 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 HCFC1R1Q9NWW0 138 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
DFFA-203ENST00000476658 USTQ9Y2C2 406 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 YIPF1Q9Y548 306 aa16.11■□□□□ 0.17
DFFA-203ENST00000476658 GABRDO14764 452 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 HCRTO43612 131 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 STX10O60499 249 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 WARSP23381 471 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 FSHRP23945 695 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 ALDH1A3P47895 512 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 SMARCB1Q12824 385 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 PLD1Q13393 1074 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 MGAT5BQ3V5L5 792 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 PABPC1LQ4VXU2 614 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 INTS6LQ5JSJ4 861 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 LIMS2Q7Z4I7 341 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 TTC9BQ8N6N2 239 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 OR6B3Q8NGW1 331 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 C2orf15Q8WU43 125 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 ZNF512Q96ME7 567 aaPredicted RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 CEP63Q96MT8 703 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 CORO1BQ9BR76 489 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 MRPL45Q9BRJ2 306 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 IMPG2Q9BZV3 1241 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 VRTNQ9H8Y1 702 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 TMEM8AQ9HCN3 771 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.1■□□□□ 0.173e-10■■■■■ 57.7
DFFA-203ENST00000476658 DNMT3BQ9UBC3 853 aaKnown RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 ARMCX3Q9UH62 379 aaPredicted RBP16.1■□□□□ 0.17
DFFA-203ENST00000476658 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
DFFA-203ENST00000476658 TACC1O75410 805 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 SOAT2O75908 522 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 P4HA1P13674 534 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 PTPN2P17706 415 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 LMO2P25791 158 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 GTF2H1P32780 548 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 GNL1P36915 607 aaPredicted RBP16.09■□□□□ 0.17
DFFA-203ENST00000476658 MXI1P50539 228 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 EPHB3P54753 998 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
DFFA-203ENST00000476658 KRT39Q6A163 491 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 FILIP1Q7Z7B0 1213 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 TAS1R2Q8TE23 839 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 TAF4BQ92750 862 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 SYT15Q9BQS2 421 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
DFFA-203ENST00000476658 TMLHEQ9NVH6 421 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
DFFA-203ENST00000476658 PTPRDP23468 1912 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 MYH10P35580 1976 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 ASS1P00966 412 aaKnown RBP16.08■□□□□ 0.16
DFFA-203ENST00000476658 RHOP08100 348 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 RAP1GAPP47736 663 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 TUFMP49411 452 aaKnown RBP16.08■□□□□ 0.16
DFFA-203ENST00000476658 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.16
DFFA-203ENST00000476658 SPOPLQ6IQ16 392 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 ZDHHC14Q8IZN3 488 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
DFFA-203ENST00000476658 MYADMQ96S97 322 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
DFFA-203ENST00000476658 CEP72Q9P209 647 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 HSFX1Q9UBD0 423 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 MUTYHQ9UIF7 546 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
DFFA-203ENST00000476658 MUC3AQ02505 3323 aa16.08■□□□□ 0.16
DFFA-203ENST00000476658 MYBPHLA2RUH7 354 aa16.07■□□□□ 0.16
DFFA-203ENST00000476658 A8MXQ7 604 aa16.07■□□□□ 0.16
DFFA-203ENST00000476658 N4BP1O75113 896 aaKnown RBP16.07■□□□□ 0.16
DFFA-203ENST00000476658 ATP2C2O75185 946 aa16.07■□□□□ 0.16
DFFA-203ENST00000476658 FGFR1OPO95684 399 aaKnown RBP16.07■□□□□ 0.16
DFFA-203ENST00000476658 MBD3O95983 291 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms