RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 U2AF2P26368 475 aaKnown RBP eCLIP17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 TNFSF9P41273 254 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 MATR3P43243 847 aaKnown RBP eCLIP17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 LILRA4P59901 499 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 PPP2R3AQ06190 1150 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 SLC39A12Q504Y0 691 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 SYT13Q7L8C5 426 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 TMEM150AQ86TG1 271 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 RIN3Q8TB24 985 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 GIPC2Q8TF65 315 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 GATA6Q92908 595 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 USP13Q92995 863 aaPredicted RBP17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 EBF1Q9UH73 591 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 STK24Q9Y6E0 443 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 EML5Q05BV3 1969 aa17.84■□□□□ 0.45
APOBEC3F-203ENST00000476513 PKD1L2Q7Z442 2459 aa17.83■□□□□ 0.45
APOBEC3F-203ENST00000476513 PP2D1A8MPX8 630 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 APBB3O95704 486 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 PLS3P13797 630 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 CSRP1P21291 193 aaKnown RBP17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 AVPR1AP37288 418 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 AMPD2Q01433 879 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 ST3GAL1Q11201 340 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 BFSP1Q12934 665 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 DMC1Q14565 340 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 NBR1Q14596 966 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 TAF12Q16514 161 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 FBXO43Q4G163 708 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 MAB21L3Q8N8X9 362 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 RPLP0P6Q8NHW5 317 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 P2RY13Q9BPV8 354 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 SCNM1Q9BWG6 230 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 ZCWPW1Q9H0M4 648 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 FOXP1Q9H334 677 aaPredicted RBP17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 TDP1Q9NUW8 608 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 ZMYM5Q9UJ78 669 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 TBX20Q9UMR3 447 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 ATG2BQ96BY7 2078 aa17.83■□□□□ 0.44
APOBEC3F-203ENST00000476513 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 F11P03951 625 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 CYP11A1P05108 521 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 CEACAM1P13688 526 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 GUCY2CP25092 1073 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 NMT1P30419 496 aaKnown RBP17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 GBP1P32455 592 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 SMTNP53814 917 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 RAD51AP2Q09MP3 1159 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 ENOX2Q16206 610 aaKnown RBP17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 SPATA1Q5VX52 437 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 EZH1Q92800 747 aaPredicted RBP17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 TIPINQ9BVW5 301 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 TMEM9BQ9NQ34 198 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 INVSQ9Y283 1065 aa17.82■□□□□ 0.44
APOBEC3F-203ENST00000476513 CDX4O14627 284 aaPredicted RBP17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 KHNYNO15037 678 aaKnown RBP17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 FAM189A1O60320 539 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 ADRB2P07550 413 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 HAPLN1P10915 354 aaPredicted RBP17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 HMGA1P17096 107 aaKnown RBP17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 CDC25AP30304 524 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 GJA4P35212 333 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 DGKEP52429 567 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 NLRP12P59046 1061 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 ANAPC15P60006 121 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 PDGFRLQ15198 375 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 C9orf57Q5W0N0 161 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 KRT79Q5XKE5 535 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 PMS2CLQ68D20 193 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 TXNDC8Q6A555 127 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 CC2D1AQ6P1N0 951 aaPredicted RBP17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 TSPAN18Q96SJ8 248 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 RAB34Q9BZG1 259 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 KCNG1Q9UIX4 513 aa17.81■□□□□ 0.44
APOBEC3F-203ENST00000476513 PATE3B3GLJ2 98 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 PAX3P23760 479 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 DDX6P26196 483 aaKnown RBP eCLIP17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 KYAT1Q16773 422 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 JADE1Q6IE81 842 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 ACDQ96AP0 544 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 BICD1Q96G01 975 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 MMTAG2Q9BU76 263 aaKnown RBP17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 ECT2Q9H8V3 914 aa17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 RPF1Q9H9Y2 349 aaKnown RBP17.8■□□□□ 0.44
APOBEC3F-203ENST00000476513 PIRO00625 290 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 ZZEF1O43149 2961 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 IRX4P78413 519 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 IL17AQ16552 155 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 LRSAM1Q6UWE0 723 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 MON1AQ86VX9 555 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 CPA6Q8N4T0 437 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 SPPL2BQ8TCT7 592 aa17.79■□□□□ 0.44
APOBEC3F-203ENST00000476513 C2orf15Q8WU43 125 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms