RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 AGO4Q9HCK5 861 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 DMAP1Q9NPF5 467 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 FBXO9Q9UK97 447 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 GTF3C4Q9UKN8 822 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 ZNF510Q9Y2H8 683 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 UBIAD1Q9Y5Z9 338 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 WDR91A4D1P6 747 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 BCRP11274 1271 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 KCNA2P16389 499 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 RRM1P23921 792 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 KRT17Q04695 432 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 PTK6Q13882 451 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 FBXO27Q8NI29 283 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 ABTB1Q969K4 478 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 CYTH2Q99418 400 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 NAP1L3Q99457 506 aaPredicted RBP8.84□□□□□ -0.99
VAPB-205ENST00000476395 UBN1Q9NPG3 1134 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 NINJ2Q9NZG7 142 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 WHRNQ9P202 907 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 ATXN10Q9UBB4 475 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PHTF1Q9UMS5 762 aa8.84□□□□□ -0.99
VAPB-205ENST00000476395 PHIPQ8WWQ0 1821 aa8.84□□□□□ -1
VAPB-205ENST00000476395 RNASEH1O60930 286 aaKnown RBP8.83□□□□□ -1
VAPB-205ENST00000476395 ENTPD3O75355 529 aa8.83□□□□□ -1
VAPB-205ENST00000476395 LYPLA2O95372 231 aa8.83□□□□□ -1
VAPB-205ENST00000476395 POLR2MP0CAP2 368 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TAS2R40P59535 323 aa8.83□□□□□ -1
VAPB-205ENST00000476395 CLEC16AQ2KHT3 1053 aa8.83□□□□□ -1
VAPB-205ENST00000476395 C4orf33Q8N1A6 199 aa8.83□□□□□ -1
VAPB-205ENST00000476395 MAML1Q92585 1016 aa8.83□□□□□ -1
VAPB-205ENST00000476395 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TRAPPC9Q96Q05 1148 aa8.83□□□□□ -1
VAPB-205ENST00000476395 RIT2Q99578 217 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TIPINQ9BVW5 301 aa8.83□□□□□ -1
VAPB-205ENST00000476395 DCLK3Q9C098 648 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ALG13Q9NP73 1137 aaKnown RBP8.83□□□□□ -1
VAPB-205ENST00000476395 CLIC5Q9NZA1 410 aa8.83□□□□□ -1
VAPB-205ENST00000476395 LGALS13Q9UHV8 139 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SPDYE2BA6NHP3 402 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ABLIM1O14639 778 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SLC16A4O15374 487 aa8.83□□□□□ -1
VAPB-205ENST00000476395 PLA2G6O60733 806 aa8.83□□□□□ -1
VAPB-205ENST00000476395 PFDN1O60925 122 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SPDYE6P0CI01 402 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ZNF76P36508 570 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ITGA8P53708 1063 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SPDYE2Q495Y8 402 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ANO5Q75V66 913 aa8.83□□□□□ -1
VAPB-205ENST00000476395 HS2ST1Q7LGA3 356 aa8.83□□□□□ -1
VAPB-205ENST00000476395 HAUS6Q7Z4H7 955 aa8.83□□□□□ -1
VAPB-205ENST00000476395 LDHDQ86WU2 507 aa8.83□□□□□ -1
VAPB-205ENST00000476395 CCDC105Q8IYK2 499 aa8.83□□□□□ -1
VAPB-205ENST00000476395 AGGF1Q8N302 714 aaeCLIP8.83□□□□□ -1
VAPB-205ENST00000476395 ZNF276Q8N554 614 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SLC25A41Q8N5S1 370 aa8.83□□□□□ -1
VAPB-205ENST00000476395 XXYLT1Q8NBI6 393 aa8.83□□□□□ -1
VAPB-205ENST00000476395 DENND1AQ8TEH3 1009 aa8.83□□□□□ -1
VAPB-205ENST00000476395 CLPTM1LQ96KA5 538 aa8.83□□□□□ -1
VAPB-205ENST00000476395 C9orf72Q96LT7 481 aa8.83□□□□□ -1
VAPB-205ENST00000476395 CSRNP1Q96S65 589 aa8.83□□□□□ -1
VAPB-205ENST00000476395 WDR83Q9BRX9 315 aaKnown RBP8.83□□□□□ -1
VAPB-205ENST00000476395 PI4K2AQ9BTU6 479 aa8.83□□□□□ -1
VAPB-205ENST00000476395 NPHS2Q9NP85 383 aa8.83□□□□□ -1
VAPB-205ENST00000476395 PDLIM7Q9NR12 457 aa8.83□□□□□ -1
VAPB-205ENST00000476395 FBXO6Q9NRD1 293 aaPredicted RBP8.83□□□□□ -1
VAPB-205ENST00000476395 ARL8BQ9NVJ2 186 aa8.83□□□□□ -1
VAPB-205ENST00000476395 STK32BQ9NY57 414 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ANK1P16157 1881 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TTC4O95801 387 aa8.83□□□□□ -1
VAPB-205ENST00000476395 EDN1P05305 212 aa8.83□□□□□ -1
VAPB-205ENST00000476395 HSPA6P17066 643 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ACO1P21399 889 aaKnown RBP8.83□□□□□ -1
VAPB-205ENST00000476395 DSG3P32926 999 aa8.83□□□□□ -1
VAPB-205ENST00000476395 PLOD1Q02809 727 aaPredicted RBP8.83□□□□□ -1
VAPB-205ENST00000476395 ZNF252P-AS1Q0IIN9 211 aa8.83□□□□□ -1
VAPB-205ENST00000476395 MOGSQ13724 837 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TMED2Q15363 201 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SNRNP35Q16560 246 aaKnown RBP8.83□□□□□ -1
VAPB-205ENST00000476395 PLA2G4FQ68DD2 849 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ACAD10Q6JQN1 1059 aa8.83□□□□□ -1
VAPB-205ENST00000476395 MON1BQ7L1V2 547 aa8.83□□□□□ -1
VAPB-205ENST00000476395 TTC7BQ86TV6 843 aa8.83□□□□□ -1
VAPB-205ENST00000476395 SATL1Q86VE3 508 aa8.83□□□□□ -1
VAPB-205ENST00000476395 RELL1Q8IUW5 271 aa8.83□□□□□ -1
VAPB-205ENST00000476395 RSPH9Q9H1X1 276 aaPredicted RBP8.83□□□□□ -1
VAPB-205ENST00000476395 DCLRE1BQ9H816 532 aa8.83□□□□□ -1
VAPB-205ENST00000476395 PKD2L1Q9P0L9 805 aa8.83□□□□□ -1
VAPB-205ENST00000476395 ZBTB21Q9ULJ3 1066 aa8.83□□□□□ -1
VAPB-205ENST00000476395 NAALADL1Q9UQQ1 740 aa8.83□□□□□ -1
VAPB-205ENST00000476395 CAP2P40123 477 aa8.82□□□□□ -1
VAPB-205ENST00000476395 SKIV2L2P42285 1042 aaKnown RBP8.82□□□□□ -1
VAPB-205ENST00000476395 PSMC4P43686 418 aa8.82□□□□□ -1
VAPB-205ENST00000476395 CLDN10P78369 228 aa8.82□□□□□ -1
VAPB-205ENST00000476395 DBN1Q16643 649 aa8.82□□□□□ -1
VAPB-205ENST00000476395 AOC3Q16853 763 aa8.82□□□□□ -1
VAPB-205ENST00000476395 TKFCQ3LXA3 575 aa8.82□□□□□ -1
VAPB-205ENST00000476395 TRMT10CQ7L0Y3 403 aaKnown RBP8.82□□□□□ -1
VAPB-205ENST00000476395 UBL4BQ8N7F7 174 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms