RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NDST3O95803 873 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ATP5JP18859 108 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 HDCP19113 662 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 TUBP50607 506 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ADAM8P78325 824 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 CAP1Q01518 475 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 MAPK7Q13164 816 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 KRT32Q14532 448 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 SURF1Q15526 300 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 RAB30Q15771 203 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 FAM110CQ1W6H9 321 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 CFAP58Q5T655 872 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 EMC10Q5UCC4 262 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 OTUD7BQ6GQQ9 843 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 KLHL17Q6TDP4 642 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ZNF783Q6ZMS7 281 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 FAM43BQ6ZT52 329 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 SEM1Q6ZVN7 128 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 PCSK9Q8NBP7 692 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ADAMTS17Q8TE56 1095 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 AFG1LQ8WV93 481 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 RRP36Q96EU6 259 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 CEP95Q96GE4 821 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 LCORQ96JN0 433 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 GPHA2Q96T91 129 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 PRPF18Q99633 342 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 MYOCQ99972 504 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 EIF2AQ9BY44 585 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 TRIM54Q9BYV2 358 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ALDH8A1Q9H2A2 487 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 JMJD4Q9H9V9 463 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 SEPSECSQ9HD40 501 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 TM7SF3Q9NS93 570 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 SRRDQ9UH36 339 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ZDHHC8Q9ULC8 765 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 TCRBV7S2A1N4TA0A589 114 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 B4DLN1 442 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 FFAR3O14843 346 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 HOXC11O43248 304 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MT-ND5P03915 603 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SBK3P0C264 359 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MED14OSP0DP75 135 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 PHKA1P46020 1223 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ARFIP2P53365 341 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 NOMO3P69849 1222 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SLC13A2Q13183 592 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MRPL49Q13405 166 aaKnown RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 NFYCQ13952 458 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 PTK2BQ14289 1009 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 RNF151Q2KHN1 245 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ZNF529Q6P280 563 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ATG14Q6ZNE5 492 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ANKRD23Q86SG2 305 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 CCDC117Q8IWD4 279 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 CNPY4Q8N129 248 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MPP5Q8N3R9 675 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SIMC1Q8NDZ2 872 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 RABGGTAQ92696 567 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 HTRA1Q92743 480 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MBD6Q96DN6 1003 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 KCNC2Q96PR1 638 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MRI1Q9BV20 369 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MAGEB5Q9BZ81 275 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ENKD1Q9H0I2 346 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 KCNH6Q9H252 994 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 EPC1Q9H2F5 836 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 DHX36Q9H2U1 1008 aaKnown RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SAYSD1Q9NPB0 183 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 KRT84Q9NSB2 600 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ANKEF1Q9NU02 776 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 ZNF212Q9UDV6 495 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 SLC23A1Q9UHI7 598 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 MED16Q9Y2X0 877 aa4.77□□□□□ -1.65
VPS13D-207ENST00000476169 A0A0B4J269 797 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 A0A1W2PPH5 198 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 TRIM43BA6NCK2 446 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 CXorf49A8MYA2 514 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 BTN3A1O00481 513 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ASNA1O43681 348 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 GJB1P08034 283 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 SNRPA1P09661 255 aaKnown RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 RARBP10826 455 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 TAL1P17542 331 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 HOXD12P35452 270 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 HTRA4P83105 476 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 HABP2Q14520 560 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 KIF22Q14807 665 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ARHGAP15Q53QZ3 475 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ZNF385BQ569K4 471 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 HAUS3Q68CZ6 603 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 LIN54Q6MZP7 749 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms