RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 CCDC85CA6NKD9 419 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 A8MXQ7 604 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 FANCGO15287 622 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 INPPL1O15357 1258 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 ATMINO43313 823 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 HUS1O60921 280 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 IPO7O95373 1038 aaKnown RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 WDR5P61964 334 aaKnown RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 KRT83P78385 493 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 KIAA0319Q5VV43 1072 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 NPAS4Q8IUM7 802 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 ADGRF2Q8IZF7 708 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 FAM193BQ96PV7 902 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-217ENST00000475693 PRKAG2Q9UGJ0 569 aa19.25■□□□□ 0.67
ATG4B-217ENST00000475693 ZBBXA8MT70 800 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 FTLP02792 175 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-217ENST00000475693 H2AFXP16104 143 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-217ENST00000475693 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
ATG4B-217ENST00000475693 PNPLA4P41247 253 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 VAV2P52735 878 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 GALCP54803 685 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 INCA1Q0VD86 236 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 FBXO38Q6PIJ6 1188 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 BUB1O43683 1085 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 RFC2P35250 354 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 NAA35Q5VZE5 725 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 DENND1BQ6P3S1 775 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 VPS36Q86VN1 386 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
ATG4B-217ENST00000475693 NRP1O14786 923 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 ELF2Q15723 593 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 ARHGAP29Q52LW3 1261 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 WDTC1Q8N5D0 677 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 TOP1MTQ969P6 601 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 ARHGEF26Q96DR7 871 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 NT5C1AQ9BXI3 368 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 THAP2Q9H0W7 228 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 IL23AQ9NPF7 189 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 DGKIO75912 1065 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 SLC11A1P49279 550 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 RABGGTBP53611 331 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 TERF2Q15554 542 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 PPP1R26Q5T8A7 1209 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-217ENST00000475693 LIMS2Q7Z4I7 341 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 BCL7CQ8WUZ0 217 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-217ENST00000475693 DPF3Q92784 378 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 TJP2Q9UDY2 1190 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 CYTH4Q9UIA0 394 aa19.23■□□□□ 0.67
ATG4B-217ENST00000475693 PIK3R2O00459 728 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 CCDC130P13994 396 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 BPIFB4P59827 614 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 ETF1P62495 437 aaKnown RBP19.22■□□□□ 0.67
ATG4B-217ENST00000475693 PTPROQ16827 1216 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 DCLRE1AQ6PJP8 1040 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 RSPH1Q8WYR4 309 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 WDR24Q96S15 920 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 TMEM209Q96SK2 561 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.22■□□□□ 0.676e-13■□□□□ 10.8
ATG4B-217ENST00000475693 KANSL3Q9P2N6 904 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
ATG4B-217ENST00000475693 FNDC1Q4ZHG4 1894 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 ABHD14A-ACY1A0A1B0GW23 586 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 MOCS3O95396 460 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 UNGP13051 313 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 YWHAEP62258 255 aaKnown RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 CLEC16AQ2KHT3 1053 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 C1orf131Q8NDD1 294 aaKnown RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 DDX43Q9NXZ2 648 aaKnown RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 TULP2O00295 520 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 AARSP49588 968 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 FPGSQ05932 587 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 SYT10Q6XYQ8 523 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 FMNL3Q8IVF7 1028 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 DDX27Q96GQ7 796 aaKnown RBP19.21■□□□□ 0.67
ATG4B-217ENST00000475693 RTP3Q9BQQ7 232 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 GPR62Q9BZJ7 368 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 GOLPH3Q9H4A6 298 aa19.21■□□□□ 0.67
ATG4B-217ENST00000475693 CLDN5O00501 218 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 TACC1O75410 805 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 KIF5AQ12840 1032 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 TAS1R1Q7RTX1 841 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 OSGEPQ9NPF4 335 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 MARCH5Q9NX47 278 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 MYO1AQ9UBC5 1043 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 CHD9Q3L8U1 2897 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 TADA2AO75478 443 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 MICAL2O94851 1124 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 GJB6O95452 261 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 FGBP02675 491 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 CYP1A1P04798 512 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-217ENST00000475693 GALTP07902 379 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 H2AFZP0C0S5 128 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 ADORA2BP29275 332 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 TKTP29401 623 aaKnown RBP19.2■□□□□ 0.66
ATG4B-217ENST00000475693 GNG11P61952 73 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms