RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MYBP10242 640 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 CHRM3P20309 590 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 ZNF169Q14929 603 aaPredicted RBP8.05□□□□□ -1.12
SMC5-203ENST00000475540 ARHGAP29Q52LW3 1261 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 TSHZ1Q6ZSZ6 1077 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 MYO1HQ8N1T3 1032 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 CAGE1Q8TC20 777 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 LPIN2Q92539 896 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 RIOX1Q9H6W3 641 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 GOLGA6AQ9NYA3 693 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 PLEKHM1Q9Y4G2 1056 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMC5-203ENST00000475540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 A0A1W2PPL8 197 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 ERC2O15083 957 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 MPPED1O15442 326 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 PROM1O43490 865 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 PIM1P11309 404 aaPredicted RBP8.04□□□□□ -1.12
SMC5-203ENST00000475540 PPP3CBP16298 524 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 AGFG1P52594 562 aaKnown RBP8.04□□□□□ -1.12
SMC5-203ENST00000475540 ITIH3Q06033 890 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 KAZNQ674X7 775 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 NPNTQ6UXI9 565 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 ACTRT2Q8TDY3 377 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 RUNDC1Q96C34 613 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
SMC5-203ENST00000475540 OSBPL9Q96SU4 736 aa8.04□□□□□ -1.12
SMC5-203ENST00000475540 METTL14Q9HCE5 456 aaKnown RBP8.04□□□□□ -1.12
SMC5-203ENST00000475540 KIAA0355O15063 1070 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 MARCH6O60337 910 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 DNAJB5O75953 348 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 UNC5CO95185 931 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 NUDT3O95989 172 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 THP07101 528 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 TYRP1P17643 537 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 GCLCP48506 637 aaPredicted RBP8.03□□□□□ -1.12
SMC5-203ENST00000475540 NXPH1P58417 271 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 PTPRRQ15256 657 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 STRIP1Q5VSL9 837 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 LAYNQ6UX15 382 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 OVCH2Q7RTZ1 564 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 CELF5Q8N6W0 485 aaKnown RBP8.03□□□□□ -1.12
SMC5-203ENST00000475540 TPSD1Q9BZJ3 242 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 SYNPO2LQ9H987 977 aa8.03□□□□□ -1.12
SMC5-203ENST00000475540 ZAR1LA6NP61 321 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 ORC4O43929 436 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 GRPP07492 148 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 RARRES1P49788 294 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 TOB1P50616 345 aaPredicted RBP8.02□□□□□ -1.13
SMC5-203ENST00000475540 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 LONRF3Q496Y0 759 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 PRR16Q569H4 304 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 KIAA0895LQ68EN5 471 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 MYCBPAPQ8TBZ2 947 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 MRGPRX1Q96LB2 322 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 SLC46A1Q96NT5 459 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 MOGAT1Q96PD6 335 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 NELL2Q99435 816 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 B3GNT5Q9BYG0 378 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 AMBRA1Q9C0C7 1298 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 TMEM60Q9H2L4 133 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 HESX1Q9UBX0 185 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 MED16Q9Y2X0 877 aa8.02□□□□□ -1.13
SMC5-203ENST00000475540 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.02□□□□□ -1.13
SMC5-203ENST00000475540 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 MYO1CO00159 1063 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 HNRNPMP52272 730 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMC5-203ENST00000475540 SIM1P81133 766 aaPredicted RBP8.01□□□□□ -1.13
SMC5-203ENST00000475540 IQCB1Q15051 598 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 RBM20Q5T481 1227 aaKnown RBP8.01□□□□□ -1.13
SMC5-203ENST00000475540 SIMC1Q8NDZ2 872 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 NT5C1BQ96P26 610 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 DUSP26Q9BV47 211 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 TTYH3Q9C0H2 523 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 FAM204AQ9H8W3 233 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 FOXJ2Q9P0K8 574 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 TLK1Q9UKI8 766 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 INSL6Q9Y581 213 aa8.01□□□□□ -1.13
SMC5-203ENST00000475540 CAPN8A6NHC0 703 aa8□□□□□ -1.13
SMC5-203ENST00000475540 PHGDHO43175 533 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 CHRM2P08172 466 aa8□□□□□ -1.13
SMC5-203ENST00000475540 ATXN1LP0C7T5 689 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 KITP10721 976 aa8□□□□□ -1.13
SMC5-203ENST00000475540 CD6P30203 668 aa8□□□□□ -1.13
SMC5-203ENST00000475540 BOP1Q14137 746 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 GFOD2Q3B7J2 385 aa8□□□□□ -1.13
SMC5-203ENST00000475540 SFRP4Q6FHJ7 346 aaPredicted RBP8□□□□□ -1.13
SMC5-203ENST00000475540 TMEM108Q6UXF1 575 aa8□□□□□ -1.13
SMC5-203ENST00000475540 MAEAQ7L5Y9 396 aa8□□□□□ -1.13
SMC5-203ENST00000475540 DNAJC10Q8IXB1 793 aa8□□□□□ -1.13
SMC5-203ENST00000475540 TSR2Q969E8 191 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 PDLIM2Q96JY6 352 aa8□□□□□ -1.13
SMC5-203ENST00000475540 P2RX7Q99572 595 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 SPATA5L1Q9BVQ7 753 aa8□□□□□ -1.13
SMC5-203ENST00000475540 ZMAT3Q9HA38 289 aaKnown RBP8□□□□□ -1.13
SMC5-203ENST00000475540 KIAA1586Q9HCI6 787 aa8□□□□□ -1.13
SMC5-203ENST00000475540 XPR1Q9UBH6 696 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms