RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 O00370 1275 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 AKR1A1P14550 325 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 AXLP30530 894 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 TTC39CQ8N584 583 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 C7orf31Q8N865 590 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 EXOC4Q96A65 974 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 SNX27Q96L92 541 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 LRRC19Q9H756 370 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 SYNCQ9H7C4 482 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 FAM204AQ9H8W3 233 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 BARX2Q9UMQ3 279 aaPredicted RBP16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 SNX24Q9Y343 169 aa16.27■□□□□ 0.19
RPUSD3-215ENST00000475470 VDRP11473 427 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 GNAT1P11488 350 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 DRG2P55039 364 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 SNX17Q15036 470 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 C1orf54Q8WWF1 131 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 ZMAT2Q96NC0 199 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 SH3GL2Q99962 352 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 GOLGA8KD6RF30 607 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 MICAL2O94851 1124 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 KCNJ1P48048 391 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 NDST1P52848 882 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 PPP1R15BQ5SWA1 713 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 BEST2Q8NFU1 509 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 EXD1Q8NHP7 514 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 TMEM40Q8WWA1 233 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 FMO2Q99518 471 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 APOL6Q9BWW8 343 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 FAM124BQ9H5Z6 455 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 CYTH4Q9UIA0 394 aa16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPUSD3-215ENST00000475470 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 M0QYV0 167 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 IGHA2P01877 340 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 C6orf222P0C671 652 aaPredicted RBP16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 RALAP11233 206 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 FLT3P36888 993 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 HSD17B3P37058 310 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 CETN2P41208 172 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 ZNF252P-AS1Q0IIN9 211 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 INCA1Q0VD86 236 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 CNGA2Q16280 664 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 HEMGNQ9BXL5 484 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 F8VP50 259 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 ECEL1O95672 775 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 HMGCRP04035 888 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 KRT3P12035 628 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 GBP1P32455 592 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 OGDHQ02218 1023 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 SNX1Q13596 522 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 NME8Q8N427 588 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 CPXM1Q96SM3 734 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 NT5C1AQ9BXI3 368 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 PLAAQ9Y263 795 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
RPUSD3-215ENST00000475470 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 GOLGA6CA6NDK9 693 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 RECQL4O94761 1208 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 GOLGA6DP0CG33 693 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 AKAP5P24588 427 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 CTGFP29279 349 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 PLTPP55058 493 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 DHX9Q08211 1270 aaKnown RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 MTMR3Q13615 1198 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 PPP1R7Q15435 360 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 ODF2Q5BJF6 829 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 GLRA4Q5JXX5 417 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 RNF25Q96BH1 459 aaPredicted RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 HERPUD2Q9BSE4 406 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 OSBPL8Q9BZF1 889 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 GOLGA6AQ9NYA3 693 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 WDR35Q9P2L0 1181 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 TJP2Q9UDY2 1190 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 TUBGCP4Q9UGJ1 667 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 ABT1Q9ULW3 272 aaKnown RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 KRT14P02533 472 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 RPL21P46778 160 aaKnown RBP16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 ZBTB6Q15916 424 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 TMC3Q7Z5M5 1100 aa16.24■□□□□ 0.19
RPUSD3-215ENST00000475470 RCOR2Q8IZ40 523 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms