RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 FAM136AQ96C01 138 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 MVB12AQ96EY5 273 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 SLC35A4Q96G79 324 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 PBKQ96KB5 322 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 ARMT1Q9H993 441 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 TNFRSF18Q9Y5U5 241 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 SPATA31A3Q5VYP0 1347 aa5.9□□□□□ -1.47
LTN1-204ENST00000475344 hCG_2014768A0A024R1R8 64 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 GCLCP48506 637 aaPredicted RBP5.89□□□□□ -1.47
LTN1-204ENST00000475344 ANAPC15P60006 121 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 TBCCQ15814 346 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 VPS53Q5VIR6 699 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 TMEM108Q6UXF1 575 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 FKBP10Q96AY3 582 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 OSBPL9Q96SU4 736 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 MAP3K14Q99558 947 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 AMBRA1Q9C0C7 1298 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 PCDHA6Q9UN73 950 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 WNT6Q9Y6F9 365 aa5.89□□□□□ -1.47
LTN1-204ENST00000475344 RBMXL2O75526 392 aaKnown RBP5.88□□□□□ -1.47
LTN1-204ENST00000475344 SOAT2O75908 522 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 PDHA1P08559 390 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 HDCP19113 662 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 VCAM1P19320 739 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 BOP1Q14137 746 aaKnown RBP5.88□□□□□ -1.47
LTN1-204ENST00000475344 COLEC12Q5KU26 742 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 IFIT1BQ5T764 474 aaKnown RBP5.88□□□□□ -1.47
LTN1-204ENST00000475344 FAM160B1Q5W0V3 765 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 LAYNQ6UX15 382 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 DDX17Q92841 729 aaKnown RBP5.88□□□□□ -1.47
LTN1-204ENST00000475344 SARAFQ96BY9 339 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 FAM167AQ96KS9 214 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 TIMP4Q99727 224 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 ALG8Q9BVK2 526 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 EHD3Q9NZN3 535 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 ANKRD6Q9Y2G4 727 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 FRMD4BQ9Y2L6 1034 aa5.88□□□□□ -1.47
LTN1-204ENST00000475344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.88□□□□□ -1.47
LTN1-204ENST00000475344 WDR27A2RRH5 827 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 PPM1DO15297 605 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 PROP1O75360 226 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 ZFXP17010 805 aaPredicted RBP5.87□□□□□ -1.47
LTN1-204ENST00000475344 AKAP5P24588 427 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 TOB1P50616 345 aaPredicted RBP5.87□□□□□ -1.47
LTN1-204ENST00000475344 SOX8P57073 446 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 ZNF267Q14586 743 aaPredicted RBP5.87□□□□□ -1.47
LTN1-204ENST00000475344 KHDC1LQ5JSQ8 128 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 PPP1R32Q7Z5V6 425 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 CELF5Q8N6W0 485 aaKnown RBP5.87□□□□□ -1.47
LTN1-204ENST00000475344 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 BRINP2Q9C0B6 783 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 SARS2Q9NP81 518 aaKnown RBP5.87□□□□□ -1.47
LTN1-204ENST00000475344 CPA4Q9UI42 421 aa5.87□□□□□ -1.47
LTN1-204ENST00000475344 MANSC4A6NHS7 340 aaPredicted RBP5.86□□□□□ -1.47
LTN1-204ENST00000475344 OFD1O75665 1012 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 ALDH1L1O75891 902 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 UNC5CO95185 931 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 ALDH2P05091 517 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 PIM1P11309 404 aaPredicted RBP5.86□□□□□ -1.47
LTN1-204ENST00000475344 CCT8P50990 548 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 PROK1P58294 105 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 NKX6-1P78426 367 aaPredicted RBP5.86□□□□□ -1.47
LTN1-204ENST00000475344 NHLH1Q02575 133 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 TMEM119Q4V9L6 283 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.86□□□□□ -1.47
LTN1-204ENST00000475344 KLHDC4Q8TBB5 520 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 HPS3Q969F9 1004 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 RFKQ969G6 155 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 MTFMTQ96DP5 389 aaKnown RBP5.86□□□□□ -1.47
LTN1-204ENST00000475344 CDK5RAP3Q96JB5 506 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 CGRRF1Q99675 332 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 STAP2Q9UGK3 403 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 PADI4Q9UM07 663 aa5.86□□□□□ -1.47
LTN1-204ENST00000475344 GCOM1H8Y6P7 765 aaPredicted RBP5.85□□□□□ -1.47
LTN1-204ENST00000475344 AP1G1O43747 822 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 CDK4P11802 303 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 NDUFB7P17568 137 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 ABCG1P45844 678 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 ZNF134P52741 427 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 SRSF4Q08170 494 aaKnown RBP5.85□□□□□ -1.47
LTN1-204ENST00000475344 BMPR2Q13873 1038 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 LONRF3Q496Y0 759 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 PLAC9Q5JTB6 97 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 NUP88Q99567 741 aaPredicted RBP5.85□□□□□ -1.47
LTN1-204ENST00000475344 SERHLQ9NQF3 203 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 HESX1Q9UBX0 185 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 SERTAD3Q9UJW9 196 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 STXBP5LQ9Y2K9 1186 aa5.85□□□□□ -1.47
LTN1-204ENST00000475344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.85□□□□□ -1.47
LTN1-204ENST00000475344 DCLK1O15075 740 aa5.84□□□□□ -1.47
LTN1-204ENST00000475344 DNAJB5O75953 348 aa5.84□□□□□ -1.47
LTN1-204ENST00000475344 GRPP07492 148 aa5.84□□□□□ -1.47
LTN1-204ENST00000475344 HNRNPCP07910 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
LTN1-204ENST00000475344 WT1P19544 449 aaPredicted RBP5.84□□□□□ -1.47
LTN1-204ENST00000475344 CLCN2P51788 898 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms