RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PI15O43692 258 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 HUS1O60921 280 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SOAT2O75908 522 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 VNN2O95498 520 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 TNNC2P02585 160 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SLFN14P0C7P3 912 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 PFKFB1P16118 471 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 GJA1P17302 382 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 NPR3P17342 541 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 AOC1P19801 751 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 CCR2P41597 374 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 CYP2J2P51589 502 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 RBP5P82980 135 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 TCF15Q12870 199 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 MGAT5BQ3V5L5 792 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 PRSS36Q5K4E3 855 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 CWF19L1Q69YN2 538 aaKnown RBP10.15□□□□□ -0.78
PDPN-204ENST00000475043 CENPPQ6IPU0 288 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 EPM2AIP1Q7L775 607 aaPredicted RBP10.15□□□□□ -0.78
PDPN-204ENST00000475043 TTC9BQ8N6N2 239 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 LEMD2Q8NC56 503 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SCFD1Q8WVM8 642 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 BORCS6Q96GS4 357 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 ANKRD36BP1Q96IX9 119 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SEPT5Q99719 369 aaPredicted RBP10.15□□□□□ -0.78
PDPN-204ENST00000475043 ZCWPW1Q9H0M4 648 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SLITRK6Q9H5Y7 841 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 KIAA1586Q9HCI6 787 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 AVENQ9NQS1 362 aaPredicted RBP10.15□□□□□ -0.78
PDPN-204ENST00000475043 ARHGEF3Q9NR81 526 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 SLC2A4RGQ9NR83 387 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 AGPAT3Q9NRZ7 376 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 ZDHHC9Q9Y397 364 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 UBE4BO95155 1302 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 TGFB1I1O43294 461 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 DLATP10515 647 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 TNNI1P19237 187 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 CMA1P23946 247 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 SNW1Q13573 536 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 BECN1Q14457 450 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 SURF1Q15526 300 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 TEAD2Q15562 447 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 TAF12Q16514 161 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 SNRNP35Q16560 246 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 DUOXA2Q1HG44 320 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 SCARA3Q6AZY7 606 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 TANGO2Q6ICL3 276 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 HS2ST1Q7LGA3 356 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 ALYREFQ86V81 257 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 PACS2Q86VP3 889 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 DCP1BQ8IZD4 617 aaKnown RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 LRRC52Q8N7C0 313 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 XXYLT1Q8NBI6 393 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 ATOH1Q92858 354 aaPredicted RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 CCDC127Q96BQ5 260 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 PAGE5Q96GU1 130 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 FNBP1Q96RU3 617 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 RTP3Q9BQQ7 232 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 DNAJC25Q9H1X3 360 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 TBC1D17Q9HA65 648 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 ZFP14Q9HCL3 533 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 EXOC1Q9NV70 894 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 FAM86C1Q9NVL1 165 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 INTS13Q9NVM9 706 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 ABI2Q9NYB9 513 aaPredicted RBP10.14□□□□□ -0.79
PDPN-204ENST00000475043 SNX9Q9Y5X1 595 aa10.14□□□□□ -0.79
PDPN-204ENST00000475043 PTPRJQ12913 1337 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 A0A1W2PRU2 124 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 ECI2O75521 394 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 MICAL2O94851 1124 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 ACAT1P24752 427 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 SYKP43405 635 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 EPHA5P54756 1037 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 MYL7Q01449 175 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 TSPY1Q01534 308 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 PFKPQ01813 784 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 EHHADHQ08426 723 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 MYO1EQ12965 1108 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 GRM2Q14416 872 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 VEPH1Q14D04 833 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 KNOP1Q1ED39 458 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 FAM78AQ5JUQ0 283 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 DNAJB7Q7Z6W7 309 aaPredicted RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 ITIH5Q86UX2 942 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 LRRTM3Q86VH5 581 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 WDR49Q8IV35 697 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 PDCL2Q8N4E4 241 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 SHKBP1Q8TBC3 707 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 PSMG2Q969U7 264 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 ELSPBP1Q96BH3 223 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 HPDLQ96IR7 371 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 SHDQ96IW2 340 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms