RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 NSRP1Q9H0G5 558 aaKnown RBP4.34□□□□□ -1.72
USP16-205ENST00000474835 AKIP1Q9NQ31 210 aa4.34□□□□□ -1.72
USP16-205ENST00000474835 VAV3Q9UKW4 847 aa4.34□□□□□ -1.72
USP16-205ENST00000474835 GIT1Q9Y2X7 761 aa4.34□□□□□ -1.72
USP16-205ENST00000474835 HEY1Q9Y5J3 304 aa4.34□□□□□ -1.72
USP16-205ENST00000474835 GAKO14976 1311 aa4.34□□□□□ -1.72
USP16-205ENST00000474835 NLRC5Q86WI3 1866 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 FRMPD3Q5JV73 1810 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ANKRD62A6NC57 917 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PDXKO00764 312 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HNRNPRO43390 633 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 CCDC22O60826 627 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CAMTA2O94983 1202 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 GCP02774 474 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HPDP32754 393 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 HALP42357 657 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HNRNPFP52597 415 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 CHN2P52757 468 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 MLLT10P55197 1068 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 MXRA7P84157 204 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ATP11AP98196 1134 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 IFIT5Q13325 482 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 FRG1Q14331 258 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 STAT4Q14765 748 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 WTAPQ15007 396 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 RCN1Q15293 331 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ZNF174Q15697 407 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PHKG1Q16816 387 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 KRT71Q3SY84 523 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NHSL2Q5HYW2 709 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 FAXCQ5TGI0 409 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TMEM53Q6P2H8 277 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 FBXO33Q7Z6M2 555 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 DHDDSQ86SQ9 333 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 MICU3Q86XE3 530 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 LIX1LQ8IVB5 337 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 DNAJC10Q8IXB1 793 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 LMNTD2Q8IXW0 634 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 COLGALT2Q8IYK4 626 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 FBXO36Q8NEA4 188 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HELBQ8NG08 1087 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 ZNF420Q8TAQ5 688 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 GFM2Q969S9 779 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SLCO4A1Q96BD0 722 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ZNF653Q96CK0 615 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HINFPQ9BQA5 517 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 AP1M1Q9BXS5 423 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TRIM4Q9C037 500 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 WNT8AQ9H1J5 351 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SLCO1B3Q9NPD5 702 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 LUC7LQ9NQ29 371 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SLC52A3Q9NQ40 469 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 AVENQ9NQS1 362 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 MTMR10Q9NXD2 777 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 KCNK4Q9NYG8 393 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 UVRAGQ9P2Y5 699 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SCOCQ9UIL1 159 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 DBR1Q9UK59 544 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 FAM196BA6NMK8 535 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TRIM77I1YAP6 450 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 RASGRF2O14827 1237 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 SLC37A4O43826 429 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CDH16O75309 829 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PRDM1O75626 825 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 BAIAP3O94812 1187 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SERPINB2P05120 415 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NAGAP17050 411 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 TATP17735 454 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 GLDCP23378 1020 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 IDUAP35475 653 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ACADSBP45954 432 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CHRNEQ04844 493 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 GABPAQ06546 454 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 EXOC3L4Q17RC7 722 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CCDC70Q6NSX1 233 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NIPAL1Q6NVV3 410 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PPP1R21Q6ZMI0 780 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 CYP4V2Q6ZWL3 525 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 GALNT13Q8IUC8 556 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ULK2Q8IYT8 1036 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NME8Q8N427 588 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PIP4P2Q8N4L2 257 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NAT8LQ8N9F0 302 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 MFSD2AQ8NA29 543 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 GIMAP1Q8WWP7 306 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ERP27Q96DN0 273 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 RNF170Q96K19 258 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 ANKRD60Q9BZ19 345 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 STMN4Q9H169 189 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SAMD15Q9P1V8 674 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 HECAQ9UBI9 543 aaPredicted RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 ZNF180Q9UJW8 692 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 DRG1Q9Y295 367 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 SQORQ9Y6N5 450 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 PLXNA3P51805 1871 aa4.33□□□□□ -1.72
USP16-205ENST00000474835 NYNRINQ9P2P1 1898 aaKnown RBP4.33□□□□□ -1.72
USP16-205ENST00000474835 ADGRA2Q96PE1 1338 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms