RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LRRN2O75325 713 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 SOAT2O75908 522 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 CLSTN1O94985 981 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
VARS-223ENST00000474643 RPN1P04843 607 aaKnown RBP16.28■□□□□ 0.2
VARS-223ENST00000474643 ITGB3P05106 788 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 TMEM191BP0C7N4 346 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 POLR2BP30876 1174 aaKnown RBP16.28■□□□□ 0.2
VARS-223ENST00000474643 CDR1P51861 262 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 BFSP1Q12934 665 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 PPP2R5DQ14738 602 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 KMT5BQ4FZB7 885 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 PCIF1Q9H4Z3 704 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
VARS-223ENST00000474643 UBE4BO95155 1302 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 GOLGA8IPA6NC78 632 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 GOLGA8JA6NMD2 632 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 HEPACAM2A8MVW5 462 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 HUS1O60921 280 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 CYP11A1P05108 521 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 SP9P0CG40 484 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 GARTP22102 1010 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 GABRR2P28476 465 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 VIPR2P41587 438 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 KPNA1P52294 538 aaPredicted RBP16.27■□□□□ 0.2
VARS-223ENST00000474643 EPHA5P54756 1037 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
VARS-223ENST00000474643 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 SMARCB1Q12824 385 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 PSMD2Q13200 908 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 WSCD1Q658N2 575 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 VITQ6UXI7 678 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 DNAJB7Q7Z6W7 309 aaPredicted RBP16.27■□□□□ 0.2
VARS-223ENST00000474643 BRSK2Q8IWQ3 736 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 EFCAB13Q8IY85 973 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 CSGALNACT2Q8N6G5 542 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 SHKBP1Q8TBC3 707 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
VARS-223ENST00000474643 PSMG2Q969U7 264 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 ANKRD36BP1Q96IX9 119 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 ZSWIM3Q96MP5 696 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 TMEM209Q96SK2 561 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 AGAP1Q9UPQ3 857 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 PIAS3Q9Y6X2 628 aa16.27■□□□□ 0.2
VARS-223ENST00000474643 MIA3Q5JRA6 1907 aa16.27■□□□□ 0.19
VARS-223ENST00000474643 VPS13AQ96RL7 3174 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 EXTL3O43909 919 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 FCARP24071 287 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 CDC25CP30307 473 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ADSSP30520 456 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 MYL7Q01449 175 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 GPR158Q5T848 1215 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 MFSD6LQ8IWD5 586 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 GPD1LQ8N335 351 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 DDX23Q9BUQ8 820 aaKnown RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 CRISPLD1Q9H336 500 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ZNF334Q9HCZ1 680 aaPredicted RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 DLGAP2Q9P1A6 1054 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 HSFX1Q9UBD0 423 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ITGA11Q9UKX5 1188 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 MTF2Q9Y483 593 aaPredicted RBP16.26■□□□□ 0.19
VARS-223ENST00000474643 PCDHB5Q9Y5E4 795 aa16.26■□□□□ 0.19
VARS-223ENST00000474643 ANK1P16157 1881 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 NOTCH4Q99466 2003 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 KIAA0391O15091 583 aaKnown RBP16.25■□□□□ 0.19
VARS-223ENST00000474643 KLRC4O43908 158 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 TNNC2P02585 160 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 GLULP15104 373 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 CRELD2Q6UXH1 353 aaPredicted RBP16.25■□□□□ 0.19
VARS-223ENST00000474643 EPM2AIP1Q7L775 607 aaPredicted RBP16.25■□□□□ 0.19
VARS-223ENST00000474643 TMC8Q8IU68 726 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 TTC9BQ8N6N2 239 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 SCFD1Q8WVM8 642 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 FAM3CQ92520 227 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 TRPV4Q9HBA0 871 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
VARS-223ENST00000474643 ZNF233A6NK53 670 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 MOSPD3O75425 235 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 KIF20AO95235 890 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 SMC2O95347 1197 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 VNN2O95498 520 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 RBP5P82980 135 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 EHHADHQ08426 723 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms