RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PLD1Q13393 1074 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 HTR4Q13639 388 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 POTEHQ6S545 545 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 TMEM86AQ8N2M4 240 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 SLC44A3Q8N4M1 653 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 GPR152Q8TDT2 470 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 FGF14Q92915 247 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 KXD1Q9BQD3 176 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 NXF1Q9UBU9 619 aaKnown RBP17.17■□□□□ 0.34
ITGB1-210ENST00000474568 TSC2P49815 1807 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 TECTAO75443 2155 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 DOCK6Q96HP0 2047 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ATP2C2O75185 946 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 AKAP3O75969 853 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 CFHP08603 1231 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 PDGFRBP09619 1106 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 TRIM49P0CI25 452 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 TRIM49CP0CI26 452 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 LMO2P25791 158 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 PRCPP42785 496 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 TNNC1P63316 161 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ADAM9Q13443 819 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 INTS6LQ5JSJ4 861 aaKnown RBP17.16■□□□□ 0.34
ITGB1-210ENST00000474568 PRSS36Q5K4E3 855 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-210ENST00000474568 SDHAF4Q5VUM1 108 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 KBTBD7Q8WVZ9 684 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 TIGD1Q96MW7 591 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ACBD6Q9BR61 282 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 MRPL45Q9BRJ2 306 aaKnown RBP17.16■□□□□ 0.34
ITGB1-210ENST00000474568 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ZNF334Q9HCZ1 680 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-210ENST00000474568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■■■■■ 139.7
ITGB1-210ENST00000474568 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
ITGB1-210ENST00000474568 GTF3C4Q9UKN8 822 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 FBXL21Q9UKT6 434 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 DUSP12Q9UNI6 340 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 PCDHB5Q9Y5E4 795 aa17.16■□□□□ 0.34
ITGB1-210ENST00000474568 ANHXE9PGG2 379 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 ZNF197O14709 1029 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 MOSPD3O75425 235 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 C4BPAP04003 597 aaKnown RBP17.15■□□□□ 0.34
ITGB1-210ENST00000474568 HAPLN1P10915 354 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-210ENST00000474568 ATF6P18850 670 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 LHX1P48742 406 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 NCOA4Q13772 614 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 TEAD2Q15562 447 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 SCARA5Q6ZMJ2 495 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 TMC8Q8IU68 726 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 FAM186BQ8IYM0 893 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 SPPL2BQ8TCT7 592 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
ITGB1-210ENST00000474568 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-210ENST00000474568 A0A1W2PRU2 124 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 MYBPHLA2RUH7 354 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 GABRDO14764 452 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 VNN1O95497 513 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 PCSK1P29120 753 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 RAP1GAPP47736 663 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 VAMP7P51809 220 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 VEPH1Q14D04 833 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 C1orf220Q5T0J3 134 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 DNAJB7Q7Z6W7 309 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 GPIHBP1Q8IV16 184 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SUGP1Q8IWZ8 645 aaKnown RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SHKBP1Q8TBC3 707 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 TMC2Q8TDI7 906 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 C2orf15Q8WU43 125 aaKnown RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 ZSWIM3Q96MP5 696 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 XYLT2Q9H1B5 865 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SNX25Q9H3E2 840 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SLITRK6Q9H5Y7 841 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 SMYD3Q9H7B4 428 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 AVENQ9NQS1 362 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-210ENST00000474568 MAN1B1Q9UKM7 699 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
ITGB1-210ENST00000474568 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 BIN1O00499 593 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 KRT13P13646 458 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 WARSP23381 471 aaKnown RBP17.13■□□□□ 0.33
ITGB1-210ENST00000474568 CYP2F1P24903 491 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
ITGB1-210ENST00000474568 GCLMP48507 274 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 AP3M2P53677 418 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
ITGB1-210ENST00000474568 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 TAF12Q16514 161 aa17.13■□□□□ 0.33
ITGB1-210ENST00000474568 NFE2Q16621 373 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms