RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 KIAA1328Q86T90 577 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 DDX53Q86TM3 631 aaKnown RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 ACOT1Q86TX2 421 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 SLC47A2Q86VL8 602 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 SLC39A11Q8N1S5 342 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 B3GALNT2Q8NCR0 500 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 TMEM35BQ8NCS4 154 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF606Q8WXB4 792 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 ELMO3Q96BJ8 720 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CYFIP2Q96F07 1278 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 TRIM11Q96F44 468 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 SYT15Q9BQS2 421 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 C11orf84Q9BUA3 381 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11□□□□□ -0.65
COL12A1-206ENST00000474564 MRPL17Q9NRX2 175 aaKnown RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 CACNG4Q9UBN1 327 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 ADAMTS1Q9UHI8 967 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 TIMM13Q9Y5L4 95 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 ANK1P16157 1881 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 MICAL3Q7RTP6 2002 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 EIF3CLB5ME19 914 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 I3L4J1 428 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GABRDO14764 452 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 FGF18O76093 207 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 OAZ2O95190 189 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 NDUFA10O95299 355 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SOD2P04179 222 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GZMAP12544 262 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 FGFR3P22607 806 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 BMPR1AP36894 532 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 NSFP46459 744 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GLUD2P49448 558 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 RGS19P49795 217 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 KIF11P52732 1056 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 PLCB3Q01970 1234 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 UBE3AQ05086 875 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SLC18A3Q16572 532 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 CCDC122Q5T0U0 273 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 RASIP1Q5U651 963 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 TAF3Q5VWG9 929 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 ELMSAN1Q6PJG2 1045 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 LIMS2Q7Z4I7 341 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SPATA2LQ8IUW3 424 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GPR65Q8IYL9 337 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SLC4A11Q8NBS3 891 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 C3orf58Q8NDZ4 430 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 EPS8L1Q8TE68 723 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 EIF3CQ99613 913 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 CHP1Q99653 195 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GDF15Q99988 308 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 TSGA10Q9BZW7 698 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SDCBP2Q9H190 292 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 ARHGAP20Q9P2F6 1191 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 AJAP1Q9UKB5 411 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 LZTS1Q9Y250 596 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
COL12A1-206ENST00000474564 HTTP42858 3142 aa10.99□□□□□ -0.65
COL12A1-206ENST00000474564 RTN2O75298 545 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 PNMA6AP0CW24 399 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 SETSIPP0DME0 302 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 CPB1P15086 417 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 DESP17661 470 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 FECHP22830 423 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 TKTP29401 623 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ELF1P32519 619 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 MAGEA1P43355 309 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF132P52740 706 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 KIF5AQ12840 1032 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 IFI16Q16666 785 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 C9orf50Q5SZB4 431 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 LIN9Q5TKA1 542 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ARHGAP17Q68EM7 881 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ALKBH5Q6P6C2 394 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 WDR59Q6PJI9 974 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 NOP9Q86U38 636 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 TDHQ8IZJ6 230 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 VPS52Q8N1B4 723 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 UBR7Q8N806 425 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 MYCBPAPQ8TBZ2 947 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 KIAA1524Q8TCG1 905 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 MICAL1Q8TDZ2 1067 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 IPO4Q8TEX9 1081 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 C2orf15Q8WU43 125 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 KBTBD7Q8WVZ9 684 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 RIN2Q8WYP3 895 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 TGS1Q96RS0 853 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 EMILIN2Q9BXX0 1053 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 LHX5Q9H2C1 402 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 SLC28A3Q9HAS3 691 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 RC3H2Q9HBD1 1191 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms