RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 GGA1Q9UJY5 639 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 NOCTQ9UK39 431 aaKnown RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 VAV3Q9UKW4 847 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 MTMR7Q9Y216 660 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 NR2E1Q9Y466 385 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 PCDHB2Q9Y5E7 798 aa8.45□□□□□ -1.06
CCDC93-208ENST00000474546 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 COL2A1P02458 1487 aaPredicted RBP8.45□□□□□ -1.06
CCDC93-208ENST00000474546 SPTBN4Q9H254 2564 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 SMIM22K7EJ46 135 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 STRNO43815 780 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 GAS7O60861 476 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 STK10O94804 968 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ITGAVP06756 1048 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 PIM1P11309 404 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CYP11B1P15538 503 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 IVDP26440 423 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 TARSP26639 723 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 RGS2P41220 211 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ABL2P42684 1182 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 HSPA13P48723 471 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CASP4P49662 377 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CYP2J2P51589 502 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ARFIP2P53365 341 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CACNA2D1P54289 1103 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 INHBEP58166 350 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 RHBDL3P58872 404 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CDK16Q00536 496 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 C1QBPQ07021 282 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ASPHQ12797 758 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 KLF1Q13351 362 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 RCN2Q14257 317 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 UBE2SQ16763 222 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 TAF1BQ53T94 588 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 OR52E8Q6IFG1 317 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 HHIPL2Q6UWX4 724 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 KYAT3Q6YP21 454 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 TMEM179Q6ZVK1 233 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ACAD11Q709F0 780 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 OTUD6AQ7L8S5 288 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ADAT2Q7Z6V5 191 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ZC3H18Q86VM9 953 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 SPICE1Q8N0Z3 855 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 FBXL13Q8NEE6 735 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ZNF75CPQ92670 426 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 PRCCQ92733 491 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 KRT35Q92764 455 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 SLC5A5Q92911 643 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 DCPSQ96C86 337 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ZBTB10Q96DT7 871 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 MTBPQ96DY7 904 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 RBM17Q96I25 401 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ZFRQ96KR1 1074 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 CYTH2Q99418 400 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 TEKT3Q9BXF9 490 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 DENND2DQ9H6A0 471 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 MANSC1Q9H8J5 431 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 C1orf112Q9NSG2 853 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 NMRK1Q9NWW6 199 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 MKS1Q9NXB0 559 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 MAP3K20Q9NYL2 800 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ATXN10Q9UBB4 475 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
CCDC93-208ENST00000474546 HAO1Q9UJM8 370 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ANAPC7Q9UJX3 599 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 NEU2Q9Y3R4 380 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 EMSYQ7Z589 1322 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 IGSF9BQ9UPX0 1349 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 ATRNL1Q5VV63 1379 aa8.44□□□□□ -1.06
CCDC93-208ENST00000474546 EPG5Q9HCE0 2579 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 NPHP3-ACAD11A0A0J9YXS1 232 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ARHGAP10A1A4S6 786 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TMEM110-MUSTN1A8MSY1 372 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 K7ENM7 598 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 MEIS2O14770 477 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CAPN9O14815 690 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CLIC2O15247 247 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 MSH4O15457 936 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 GSC2O15499 205 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CLDN3O15551 220 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 EDIL3O43854 480 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TYROBPO43914 113 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 PEX1O43933 1283 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 LSM8O95777 96 aaKnown RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 GJB1P08034 283 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CCDC166P0CW27 439 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 DLATP10515 647 aaKnown RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 PLS3P13797 630 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TBXAS1P24557 533 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ACAT1P24752 427 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms