RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 COPAP53621 1224 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 ARL4CP56559 192 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 TAF12Q16514 161 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 TBR1Q16650 682 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 FAM160B1Q5W0V3 765 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 EFCAB12Q6NXP0 572 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 GGT6Q6P531 493 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 FAM111BQ6SJ93 734 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF761Q86XN6 746 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-212ENST00000473961 GALNT15Q8N3T1 639 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 LINC01356Q8N9X3 169 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 ATG16L2Q8NAA4 619 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 ZSCAN31Q96LW9 406 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-212ENST00000473961 MYOCQ99972 504 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 CHST8Q9H2A9 424 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 GSTO2Q9H4Y5 243 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 SEC61A2Q9H9S3 476 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 PNMA2Q9UL42 364 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 OAZ3Q9UMX2 235 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 AQP7P3A6NL99 342 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 PRICKLE3O43900 615 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 B4GALT4O60513 344 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 CDC14BO60729 498 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 AGFG2O95081 481 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 CR2P20023 1033 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 ACVR2AP27037 513 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 UCP3P55916 312 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 PTK2BQ14289 1009 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SPARCL1Q14515 664 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 MGAT5BQ3V5L5 792 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 METTL24Q5JXM2 366 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 WDR78Q5VTH9 848 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 DCAF12L1Q5VU92 463 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 MZT2AQ6P582 158 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 ARHGEF18Q6ZSZ5 1173 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 KRT28Q7Z3Y7 464 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 ADGRG2Q8IZP9 1017 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 LGI4Q8N135 537 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 VGLL2Q8N8G2 317 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SLC35B2Q8TB61 432 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 TBC1D15Q8TC07 691 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 FAM71BQ8TC56 605 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF384Q8TF68 577 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 NUP133Q8WUM0 1156 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SMOQ99835 787 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 CPPED1Q9BRF8 314 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SPATA5L1Q9BVQ7 753 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SCAND2PQ9GZW5 306 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 MS4A7Q9GZW8 240 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 DHX36Q9H2U1 1008 aaKnown RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 FAM83DQ9H4H8 585 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SPON1Q9HCB6 807 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 TMEM8AQ9HCN3 771 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 OBP2BQ9NPH6 170 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 TBC1D23Q9NUY8 699 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 C9orf78Q9NZ63 289 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 POGKQ9P215 609 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 XPR1Q9UBH6 696 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 SHOC2Q9UQ13 582 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 PCDHGB3Q9Y5G1 929 aa4.98□□□□□ -1.61
BRCA1-212ENST00000473961 LRRFIP2Q9Y608 721 aaKnown RBP4.98□□□□□ -1.61
BRCA1-212ENST00000473961 FAM234BA2RU67 622 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 CDHR4A6H8M9 788 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 M0R3H8 397 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 FFAR3O14843 346 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 NPC1O15118 1278 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 SOAT2O75908 522 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 DNAJB5O75953 348 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 ITGA2BP08514 1039 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 TPH1P17752 444 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 SERPINF1P36955 418 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF844Q08AG5 666 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 TBX2Q13207 712 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 IQCB1Q15051 598 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 MAPRE1Q15691 268 aaKnown RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 RAB30Q15771 203 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 ANKRD45Q5TZF3 282 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 JAKMIP3Q5VZ66 844 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 DRICH1Q6PGQ1 229 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 LAYNQ6UX15 382 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 SLC17A8Q8NDX2 589 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 FAM46DQ8NEK8 389 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 DNERQ8NFT8 737 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 OR56A3Q8NH54 315 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 CFHR4Q92496 578 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 USP13Q92995 863 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 TBC1D20Q96BZ9 403 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 MBD6Q96DN6 1003 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 MPHOSPH9Q99550 1183 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 CPEB1Q9BZB8 566 aaKnown RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 MAGEH1Q9H213 219 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 RGL1Q9NZL6 768 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 MID2Q9UJV3 735 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 CNOT11Q9UKZ1 510 aaKnown RBP4.97□□□□□ -1.61
BRCA1-212ENST00000473961 CA14Q9ULX7 337 aa4.97□□□□□ -1.61
BRCA1-212ENST00000473961 NEU2Q9Y3R4 380 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms