RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 ACTRT3Q9BYD9 372 aa4.84□□□□□ -1.63
GPCPD1-204ENST00000473797 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
GPCPD1-204ENST00000473797 SLC13A1Q9BZW2 595 aa4.84□□□□□ -1.63
GPCPD1-204ENST00000473797 POLHQ9Y253 713 aa4.84□□□□□ -1.63
GPCPD1-204ENST00000473797 MRFAP1Q9Y605 127 aa4.84□□□□□ -1.63
GPCPD1-204ENST00000473797 SHTN1A0MZ66 631 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF785A8K8V0 405 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 MYO1FO00160 1098 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 GABRDO14764 452 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF213O14771 459 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 NXPH3O95157 252 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ARIH2O95376 493 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 MT-CO1P00395 513 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 GNAI3P08754 354 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 FAM163BP0C2L3 166 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 KELP23276 732 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 PTGER1P34995 402 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 GNAI1P63096 354 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ANKRD16Q6P6B7 361 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ATRIPQ8WXE1 791 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ARHGEF3Q9NR81 526 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 MRPS18AQ9NVS2 196 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 TRHDEQ9UKU6 1024 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 ZDHHC8Q9ULC8 765 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 AGAP1Q9UPQ3 857 aa4.83□□□□□ -1.64
GPCPD1-204ENST00000473797 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 MOSPD3O75425 235 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 RARBP10826 455 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 ITGALP20701 1170 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 PIK3CGP48736 1102 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF135P52742 658 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 TUBA4AP68366 448 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 MTMR1Q13613 665 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 TBCCQ15814 346 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 AARS2Q5JTZ9 985 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 TEDDM1Q5T9Z0 273 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 MORN5Q5VZ52 161 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 C3orf20Q8ND61 904 aa4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 DDX17Q92841 729 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 RPL36ALQ969Q0 106 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-204ENST00000473797 SLC16A6O15403 523 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 EBLN1P0CF75 366 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 MYBL2P10244 700 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 CD6P30203 668 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF618Q5T7W0 954 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF66Q6ZN08 573 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 WDR53Q7Z5U6 358 aaPredicted RBP4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 KLHDC4Q8TBB5 520 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 FCRL4Q96PJ5 515 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 BHMT2Q9H2M3 363 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 WDCPQ9H6R7 721 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 SPC25Q9HBM1 224 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 USP35Q9P2H5 1018 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 RAD54BQ9Y620 910 aa4.81□□□□□ -1.64
GPCPD1-204ENST00000473797 TISP43B9A030 160 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 ADAMTS3O15072 1205 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 NDUFB7P17568 137 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 SMARCA1P28370 1054 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 EPHB2P29323 1055 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 GCLCP48506 637 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 HK3P52790 923 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 ABCB5Q2M3G0 1257 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 VPS53Q5VIR6 699 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 EFCAB2Q5VUJ9 269 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 SFRP4Q6FHJ7 346 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 USP37Q86T82 979 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 PRR18Q8N4B5 295 aa4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF48Q96MX3 618 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 TINAGL1Q9GZM7 467 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 MRPL46Q9H2W6 279 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-204ENST00000473797 PPP6CO00743 305 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 KIF20AO95235 890 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 ONECUT2O95948 504 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 TUBB4AP04350 444 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 NHLRC4P0CG21 123 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 ALDH9A1P49189 494 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 KLF9Q13886 244 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 BOP1Q14137 746 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 ODF1Q14990 250 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 TMEM119Q4V9L6 283 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 THEMIS2Q5TEJ8 643 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 ZNF804AQ7Z570 1209 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 DLL3Q9NYJ7 618 aa4.79□□□□□ -1.64
GPCPD1-204ENST00000473797 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 PRRT4C9JH25 899 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 H0YIZ8 118 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 PPM1DO15297 605 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 SLC16A3O15427 465 aaKnown RBP4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 TLR5O60602 858 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 ZRANB2O95218 330 aaKnown RBP eCLIP4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 GUCY2FP51841 1108 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 FAM160B1Q5W0V3 765 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms