RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 MAFBQ9Y5Q3 323 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 CFAP73A6NFT4 308 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 FAM47DPA6NHR8 397 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 GOLGA8SH3BPF8 625 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 GOLGA8MH3BSY2 632 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 PIGRP01833 764 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 KRT1P04264 644 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 RXRBP28702 533 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 RPA3P35244 121 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 STRN3Q13033 797 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 RIPK1Q13546 671 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 RNASEH2BQ5TBB1 312 aaKnown RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 XRRA1Q6P2D8 792 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ARHGEF18Q6ZSZ5 1173 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 KIAA0319LQ8IZA0 1049 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ARFGAP1Q8N6T3 406 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 PCYT2Q99447 389 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 TRIM6Q9C030 488 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 MTMR12Q9C0I1 747 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ADAMTS5Q9UNA0 930 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 NUMBLQ9Y6R0 609 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 hCG_1818297A0A087WSY0 165 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 C3orf70A6NLC5 250 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ABHD2P08910 425 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 CDKN2BP42772 138 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 NRLP54845 237 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 GPX6P59796 221 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 TGFB2P61812 414 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 CNTN2Q02246 1040 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 CAPSQ13938 189 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 SLC1A5Q15758 541 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 SMTNL2Q2TAL5 461 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 SPOCD1Q6ZMY3 1216 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ZBED8Q8IZ13 594 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 KIRREL3Q8IZU9 778 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 KLHL29Q96CT2 875 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-214ENST00000473778 PITPNM3Q9BZ71 974 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 IP6K2Q9UHH9 426 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 STK38LQ9Y2H1 464 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ACTL7BQ9Y614 415 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 SCINQ9Y6U3 715 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 CLUHO75153 1309 aa11.55□□□□□ -0.56
C9orf3-214ENST00000473778 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 OATP04181 439 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 RPSAP08865 295 aaKnown RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 WEE2P0C1S8 567 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 IL1R2P27930 398 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 NAMPTP43490 491 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 MYL6P60660 151 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 MOGSQ13724 837 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 EAPPQ56P03 285 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 KCNT1Q5JUK3 1230 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ANKRD22Q5VYY1 191 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 MAK16Q9BXY0 300 aaKnown RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 MYLK2Q9H1R3 596 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 C12orf65Q9H3J6 166 aaKnown RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 EBF2Q9HAK2 575 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 NKIRAS1Q9NYS0 192 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 CHKBQ9Y259 395 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ATG7O95352 703 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 CCNB1P14635 433 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 PTPRAP18433 802 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 SLC8A1P32418 973 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 HIRAP54198 1017 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 MYO1EQ12965 1108 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 RNF43Q68DV7 783 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 DRICH1Q6PGQ1 229 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 POTEHQ6S545 545 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ZBTB33Q86T24 672 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 TAB3Q8N5C8 712 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-214ENST00000473778 BBOF1Q8ND07 529 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 TMEM237Q96Q45 408 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 TRABDQ9H4I3 376 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF302Q9NR11 478 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 CYTH4Q9UIA0 394 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 HACL1Q9UJ83 578 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 ANK1P16157 1881 aa11.54□□□□□ -0.56
C9orf3-214ENST00000473778 TCRBV7S3A2A0A539 114 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 TYROBPO43914 113 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 TJP3O95049 919 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 IFNB1P01574 187 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 CD48P09326 243 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 TBXAS1P24557 533 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 VCPP55072 806 aaKnown RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 DYNLT1P63172 113 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 GPAT2Q6NUI2 795 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 PPP1R21Q6ZMI0 780 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 SCARA5Q6ZMJ2 495 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms