RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ASIC2Q16515 512 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 SMYD5Q6GMV2 418 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 KIAA1841Q6NSI8 718 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 FAM71AQ8IYT1 594 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 NT5C1AQ9BXI3 368 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 DPEP3Q9H4B8 488 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 CERS4Q9HA82 394 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 TRANK1O15050 2925 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 OAZ2O95190 189 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 CALCAP01258 141 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PAEPP09466 180 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PCSK1P29120 753 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 CLCN1P35523 988 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 GSDMDP57764 484 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 DSG1Q02413 1049 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 UBE3AQ05086 875 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 MRPL58Q14197 206 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PSMD5Q16401 504 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 ACOT1Q86TX2 421 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 OR8K1Q8NGG5 319 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 DNAI2Q9GZS0 605 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 ACP6Q9NPH0 428 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
TRAPPC12-217ENST00000473348 H7C4K7 107 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 C2CD2LO14523 706 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 CTSAP10619 480 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 CD19P15391 556 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 GNA15P30679 374 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 PDE6CP51160 858 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 PSMC1P62191 440 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 TSPY1Q01534 308 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 PTK2Q05397 1052 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 GPM6BQ13491 265 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 LRIT3Q3SXY7 679 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 KIAA0319Q5VV43 1072 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 SLC47A2Q86VL8 602 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 ARNTL2Q8WYA1 636 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 OBSL1O75147 1896 aa13.36□□□□□ -0.27
TRAPPC12-217ENST00000473348 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 OR6C75A6NL08 312 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 H3BNC9 293 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 GRM6O15303 877 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 ATP2C2O75185 946 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 CSPG5O95196 566 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 CYP11B1P15538 503 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 DNAJB1P25685 340 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 HNRNPH3P31942 346 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 CA8P35219 290 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 BPIFB4P59827 614 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 PTPN14Q15678 1187 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
TRAPPC12-217ENST00000473348 NOP9Q86U38 636 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms