RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ZSCAN23Q3MJ62 389 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 SPOPLQ6IQ16 392 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 CES5AQ6NT32 575 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 RNF19BQ6ZMZ0 732 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 OR6B3Q8NGW1 331 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.23■■□□□ 1.15
TOP3A-204ENST00000472959 C2orf15Q8WU43 125 aaKnown RBP22.23■■□□□ 1.15
TOP3A-204ENST00000472959 TMEM209Q96SK2 561 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 BCO2Q9BYV7 579 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 RHOBTB2Q9BYZ6 727 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 SMYD3Q9H7B4 428 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 APOBEC3GQ9HC16 384 aaKnown RBP22.23■■□□□ 1.15
TOP3A-204ENST00000472959 HSFX1Q9UBD0 423 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 CDH9Q9ULB4 789 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 EYSQ5T1H1 3165 aa22.23■■□□□ 1.15
TOP3A-204ENST00000472959 KCNJ18B7U540 433 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 PRRG1O14668 218 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 KCNJ12Q14500 433 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 CLUL1Q15846 466 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 MAN2A1Q16706 1144 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 SLC39A12Q504Y0 691 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 INTS6LQ5JSJ4 861 aaKnown RBP22.22■■□□□ 1.15
TOP3A-204ENST00000472959 PPM1LQ5SGD2 360 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 RARS2Q5T160 578 aaKnown RBP22.22■■□□□ 1.15
TOP3A-204ENST00000472959 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.15
TOP3A-204ENST00000472959 C12orf76Q8N812 135 aaPredicted RBP22.22■■□□□ 1.15
TOP3A-204ENST00000472959 SLC7A14Q8TBB6 771 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 ELMO3Q96BJ8 720 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 ASB2Q96Q27 587 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 FAM124BQ9H5Z6 455 aaPredicted RBP22.22■■□□□ 1.15
TOP3A-204ENST00000472959 CYP4F11Q9HBI6 524 aa22.22■■□□□ 1.15
TOP3A-204ENST00000472959 CCDC195A0A1B0GUA6 201 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 POU2F2P09086 479 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 ACAT1P24752 427 aaKnown RBP22.21■■□□□ 1.15
TOP3A-204ENST00000472959 LMO2P25791 158 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 CDH8P55286 799 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 MAPRE1Q15691 268 aaKnown RBP22.21■■□□□ 1.15
TOP3A-204ENST00000472959 TCP11X2Q5H9J9 407 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 CDKAL1Q5VV42 579 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 PTCRAQ6ISU1 281 aaPredicted RBP22.21■■□□□ 1.15
TOP3A-204ENST00000472959 TMC5Q6UXY8 1006 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 SCARA5Q6ZMJ2 495 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 GPR149Q86SP6 731 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 LRRTM3Q86VH5 581 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 TTC39CQ8N584 583 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 SYT15Q9BQS2 421 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 TUBGCP2Q9BSJ2 902 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.21■■□□□ 1.15
TOP3A-204ENST00000472959 FANCLQ9NW38 375 aa22.21■■□□□ 1.15
TOP3A-204ENST00000472959 REV3LO60673 3130 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 MTMR11A4FU01 709 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 GRXCR2A6NFK2 248 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 A8MXQ7 604 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 MBTPS2O43462 519 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 LRRN2O75325 713 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 RFPL2O75678 378 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 SEC24AO95486 1093 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 CAVIN2O95810 425 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 PDGFRBP09619 1106 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 WEE2P0C1S8 567 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 ZNF165P49910 485 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 HSP90AA4PQ58FG1 418 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 ATAT1Q5SQI0 421 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 FAM171BQ6P995 826 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 UNC93AQ86WB7 457 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 EHBP1Q8NDI1 1231 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 SPPL2BQ8TCT7 592 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 SUSD6Q92537 303 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 RIPOR3Q96MK2 946 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 PGLYRP2Q96PD5 576 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 PKMYT1Q99640 499 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 APOL5Q9BWW9 433 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 PRKD2Q9BZL6 878 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 SDCBP2Q9H190 292 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 USP15Q9Y4E8 981 aaPredicted RBP22.2■■□□□ 1.14
TOP3A-204ENST00000472959 PRUNE2Q8WUY3 3088 aa22.2■■□□□ 1.14
TOP3A-204ENST00000472959 GTPBP10A4D1E9 387 aaKnown RBP22.19■■□□□ 1.14
TOP3A-204ENST00000472959 SMTNL1A8MU46 457 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 XYLBO75191 536 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 VNN2O95498 520 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 MTHFRP42898 656 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 RAP1GAPP47736 663 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 INCA1Q0VD86 236 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 DUSP4Q13115 394 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 NCAPHQ15003 741 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 VWA3BQ502W6 1294 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 ATAD1Q8NBU5 361 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 LMO3Q8TAP4 145 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 TATDN2Q93075 761 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 TNIP3Q96KP6 325 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 NECTIN4Q96NY8 510 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 NT5C1BQ96P26 610 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 DNAI2Q9GZS0 605 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 ABCB6Q9NP58 842 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 GTF3C4Q9UKN8 822 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 PCDHB5Q9Y5E4 795 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 INSL5Q9Y5Q6 135 aa22.19■■□□□ 1.14
TOP3A-204ENST00000472959 TSC2P49815 1807 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 HCRTO43612 131 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 TRIM21P19474 475 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms