RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 FBXL13Q8NEE6 735 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 SPPL2BQ8TCT7 592 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 DNAI2Q9GZS0 605 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 CDH9Q9ULB4 789 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 POLIQ9UNA4 740 aa15.21■□□□□ 0.03
BRCA1-211ENST00000472490 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 OR4Q2P0C623 313 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 GNL1P36915 607 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 MARSP56192 900 aaKnown RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 SCARA3Q6AZY7 606 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 OR6B3Q8NGW1 331 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 SLC35C1Q96A29 364 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 POMKQ9H5K3 350 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 WDR6Q9NNW5 1121 aaKnown RBP15.2■□□□□ 0.02
BRCA1-211ENST00000472490 ANO10Q9NW15 660 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 RAB20Q9NX57 234 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 PCDHB5Q9Y5E4 795 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
BRCA1-211ENST00000472490 ANK1P16157 1881 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 MTMR11A4FU01 709 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 PMM2O15305 246 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 P4HA2O15460 535 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 CCL16O15467 120 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 WEE2P0C1S8 567 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 EPHB3P54753 998 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 ZP2Q05996 745 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 DUSP4Q13115 394 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 C4orf50Q6ZRC1 276 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 TAS1R2Q8TE23 839 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 KBTBD7Q8WVZ9 684 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 TNIP3Q96KP6 325 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 ZNF512Q96ME7 567 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 FAM124BQ9H5Z6 455 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 ABCB6Q9NP58 842 aa15.19■□□□□ 0.02
BRCA1-211ENST00000472490 MAGEC2Q9UBF1 373 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.19■□□□□ 0.02
BRCA1-211ENST00000472490 CLUHO75153 1309 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 A8MXQ7 604 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 SEC24AO95486 1093 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 TWF1Q12792 350 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 MGAT5BQ3V5L5 792 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 CREBRFQ8IUR6 639 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 SPATA2LQ8IUW3 424 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 GJD3Q8N144 294 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 LEMD2Q8NC56 503 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 FUBP3Q96I24 572 aaKnown RBP eCLIP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 RPGRIP1Q96KN7 1286 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 SYT15Q9BQS2 421 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 MRPL45Q9BRJ2 306 aaKnown RBP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 NIF3L1Q9GZT8 377 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 THAP9Q9H5L6 903 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 ABI2Q9NYB9 513 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.18■□□□□ 0.02
BRCA1-211ENST00000472490 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 YIPF1Q9Y548 306 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 ASB3Q9Y575 518 aa15.18■□□□□ 0.02
BRCA1-211ENST00000472490 PDGFRBP09619 1106 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 PTPN2P17706 415 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 ACAT1P24752 427 aaKnown RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 LMO2P25791 158 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 FMO5P49326 533 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 VEPH1Q14D04 833 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 STX1AQ16623 288 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 KLHL40Q2TBA0 621 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 CFAP221Q4G0U5 840 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 PABPC1LQ4VXU2 614 aaKnown RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 CYP4A22Q5TCH4 519 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 FAM171BQ6P995 826 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 GRASPQ7Z6J2 395 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 ITIH5Q86UX2 942 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 LRRTM3Q86VH5 581 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 OSTM1Q86WC4 334 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 TDRD5Q8NAT2 981 aaKnown RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 PI4K2AQ9BTU6 479 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms