RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 E9PAM4 449 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 HLA-EP13747 358 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 ARSAP15289 507 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 ITPKBP27987 946 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 ARL2P36404 184 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 IFNAR2P48551 515 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 SEC13P55735 322 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 YWHAHQ04917 246 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-209ENST00000472116 NBR1Q14596 966 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 EPHA7Q15375 998 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 FAM187BQ17R55 369 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 PLEKHG6Q3KR16 790 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 MOXD1Q6UVY6 613 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 SLCO6A1Q86UG4 719 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 CCDC33Q8N5R6 958 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 FAM181AQ8N9Y4 354 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 BAP1Q92560 729 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 DDX12PQ92771 950 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 FAM20AQ96MK3 541 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 DNAJC25Q9H1X3 360 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 WRAP73Q9P2S5 460 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-209ENST00000472116 SUSD2Q9UGT4 822 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 TBX20Q9UMR3 447 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
CDHR3-209ENST00000472116 CYP3A7-CYP3A51PA0A087WV96 503 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 SMIM28A0A1B0GU29 152 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 WISP1O95388 367 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 GNSP15586 552 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 CYP3A7P24462 503 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 RPL9P32969 192 aaKnown RBP11.19□□□□□ -0.62
CDHR3-209ENST00000472116 NLRP5P59047 1200 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 CTTNQ14247 550 aaKnown RBP11.19□□□□□ -0.62
CDHR3-209ENST00000472116 NCAPH2Q6IBW4 605 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 USP37Q86T82 979 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 ATP2A3Q93084 1043 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 NXPE2Q96DL1 559 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 SUSD3Q96L08 255 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-209ENST00000472116 FZD8Q9H461 694 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 TDP1Q9NUW8 608 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
CDHR3-209ENST00000472116 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 DDX6P26196 483 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDHR3-209ENST00000472116 CDC27P30260 824 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 RCAN1P53805 252 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
CDHR3-209ENST00000472116 ZNF33AQ06730 810 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 EOGTQ5NDL2 527 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 MAB21L3Q8N8X9 362 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 BEST2Q8NFU1 509 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 HMGB4Q8WW32 186 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 DYDC2Q96IM9 177 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 CDC6Q99741 560 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 SLC46A2Q9BY10 475 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 ZDHHC5Q9C0B5 715 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-209ENST00000472116 DUS2Q9NX74 493 aaKnown RBP11.18□□□□□ -0.62
CDHR3-209ENST00000472116 RGL1Q9NZL6 768 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 PCOLCE2Q9UKZ9 415 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 CABIN1Q9Y6J0 2220 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 ANK1P16157 1881 aa11.18□□□□□ -0.62
CDHR3-209ENST00000472116 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 GOLGA8CPA6NN73 597 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 ACKR2O00590 384 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 ZBTB39O15060 712 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 SGSM2O43147 1006 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 EDIL3O43854 480 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 OR4Q2P0C623 313 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 CHMLP26374 656 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 EIF2S3P41091 472 aaKnown RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 SOX4Q06945 474 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 GPR17Q13304 367 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 MTF1Q14872 753 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 PREPLQ4J6C6 727 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 NAIF1Q69YI7 327 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 CENPPQ6IPU0 288 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 MAEAQ7L5Y9 396 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 DEFB119Q8N690 84 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 DEPTORQ8TB45 409 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 EZH1Q92800 747 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 NACC1Q96RE7 527 aa11.17□□□□□ -0.62
CDHR3-209ENST00000472116 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-209ENST00000472116 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms