RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 STXBP4Q6ZWJ1 553 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 CSGALNACT2Q8N6G5 542 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 FOXD4L4Q8WXT5 416 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-213ENST00000471978 HPS3Q969F9 1004 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 MKNK1Q9BUB5 465 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 CUEDC2Q9H467 287 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 PDE11AQ9HCR9 933 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 KBTBD4Q9NVX7 518 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 ABI2Q9NYB9 513 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-213ENST00000471978 PATJQ8NI35 1801 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 YEATS4O95619 227 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 HAPLN1P10915 354 aaPredicted RBP24.27■■□□□ 1.48
C9orf3-213ENST00000471978 TSPY1Q01534 308 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 ZNF687Q8N1G0 1237 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 GPD1LQ8N335 351 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 PDCL2Q8N4E4 241 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 GLIS3Q8NEA6 775 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 GIPC2Q8TF65 315 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 FAM3CQ92520 227 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 DHX58Q96C10 678 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 FAM84AQ96KN4 292 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 TRIM9Q9C026 710 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 ITGA11Q9UKX5 1188 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 F5P12259 2224 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 COL4A2P08572 1712 aa24.27■■□□□ 1.48
C9orf3-213ENST00000471978 TICRRQ7Z2Z1 1910 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 ARNTLO00327 626 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 DPYSL4O14531 572 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 KIAA0391O15091 583 aaKnown RBP24.26■■□□□ 1.47
C9orf3-213ENST00000471978 CUTAO60888 179 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 HUS1O60921 280 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 KRT19P08727 400 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 AMPD3Q01432 767 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 FCHO2Q0JRZ9 810 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 BFSP1Q12934 665 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 SCARA3Q6AZY7 606 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 LRRC52Q8N7C0 313 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 IQUBQ8NA54 791 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 CXorf38Q8TB03 319 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 CSGALNACT1Q8TDX6 532 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 GCNAQ96QF7 691 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 L1RE1Q9UN81 338 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 PCDHB5Q9Y5E4 795 aa24.26■■□□□ 1.47
C9orf3-213ENST00000471978 CHADO15335 359 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 TMEM191BP0C7N4 346 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 CDC25CP30307 473 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 ASIC1P78348 528 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 RBP5P82980 135 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 CYP4F8P98187 520 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 MTAPQ13126 283 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 FOXD4L6Q3SYB3 417 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-213ENST00000471978 SHC4Q6S5L8 630 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 FOXD4L3Q6VB84 417 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-213ENST00000471978 MTMR12Q9C0I1 747 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 TASP1Q9H6P5 420 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 IL21Q9HBE4 155 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 TMLHEQ9NVH6 421 aa24.25■■□□□ 1.47
C9orf3-213ENST00000471978 DDX43Q9NXZ2 648 aaKnown RBP24.25■■□□□ 1.47
C9orf3-213ENST00000471978 FANCMQ8IYD8 2048 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 KINO60870 393 aaKnown RBP24.24■■□□□ 1.47
C9orf3-213ENST00000471978 MLLT6P55198 1093 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-213ENST00000471978 NFE2Q16621 373 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-213ENST00000471978 HSCBQ8IWL3 235 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 TMEM86AQ8N2M4 240 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 LRRC3BQ96PB8 259 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 ACBD6Q9BR61 282 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 PI4K2AQ9BTU6 479 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 LMAN1LQ9HAT1 526 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 GDAP2Q9NXN4 497 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 SIX4Q9UIU6 781 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 SNX9Q9Y5X1 595 aa24.24■■□□□ 1.47
C9orf3-213ENST00000471978 DMXL1Q9Y485 3027 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 ZNF233A6NK53 670 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 HSP90AA1P07900 732 aaKnown RBP24.23■■□□□ 1.47
C9orf3-213ENST00000471978 CCNE1P24864 410 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 WEE1P30291 646 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 HOXD13P35453 343 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 KPNA1P52294 538 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-213ENST00000471978 MYL7Q01449 175 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 LMBRD2Q68DH5 695 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-213ENST00000471978 ANKRD36BP1Q96IX9 119 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 CHRDQ9H2X0 955 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 INTS13Q9NVM9 706 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 OBP2AQ9NY56 170 aa24.23■■□□□ 1.47
C9orf3-213ENST00000471978 R3HCC1Q9Y3T6 440 aaKnown RBP24.23■■□□□ 1.47
C9orf3-213ENST00000471978 EIF3DO15371 548 aaKnown RBP eCLIP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PRPF40AO75400 957 aaKnown RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PRAMEF12O95522 483 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 ZSCAN22P10073 491 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PDIA4P13667 645 aaKnown RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 ACAT1P24752 427 aaKnown RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 ARHGAP29Q52LW3 1261 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 CNNM4Q6P4Q7 775 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 TSSK4Q6SA08 328 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 CBWD2Q8IUF1 395 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 ATRIPQ8WXE1 791 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 MSANTD3Q96H12 275 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 ZFYVE19Q96K21 471 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 C7orf25Q9BPX7 421 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 HINFPQ9BQA5 517 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms