RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 TFAP2BQ92481 460 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 CPB2Q96IY4 423 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 PTPN18Q99952 460 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 HERPUD2Q9BSE4 406 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 NXF1Q9UBU9 619 aaKnown RBP18.4■□□□□ 0.54
RRP1-202ENST00000471909 POLIQ9UNA4 740 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 SCINQ9Y6U3 715 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 PCNTO95613 3336 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 LACTBL1A8MY62 500 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 TLR3O15455 904 aaKnown RBP18.4■□□□□ 0.54
RRP1-202ENST00000471909 PPFIA2O75334 1257 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 DNAJC8O75937 253 aaPredicted RBP18.4■□□□□ 0.54
RRP1-202ENST00000471909 KRT19P08727 400 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 KCNJ1P48048 391 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 ZDHHC24Q6UX98 284 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 C1orf127Q8N9H9 656 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 CCDC197Q8NCU1 140 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 MDM1Q8TC05 714 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 CENPTQ96BT3 561 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 FAM129AQ9BZQ8 928 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 PARVAQ9NVD7 372 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 GRHL1Q9NZI5 618 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 SUFUQ9UMX1 484 aa18.4■□□□□ 0.54
RRP1-202ENST00000471909 COL1A2P08123 1366 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 PODXLO00592 558 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 LSM8O95777 96 aaKnown RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 MCF2P10911 925 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 SLC8A1P32418 973 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 CCDC105Q8IYK2 499 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 TXLNGYQ9BZA5 131 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 LRRC19Q9H756 370 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 GBA2Q9HCG7 927 aaPredicted RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
RRP1-202ENST00000471909 CEP83Q9Y592 693 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 ARF4P18085 180 aaPredicted RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 RPL21P46778 160 aaKnown RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 PLTPP55058 493 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 TAS2R40P59535 323 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 RPL7AP62424 266 aaKnown RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 MARCH8Q5T0T0 291 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.39■□□□□ 0.53
RRP1-202ENST00000471909 FEZF2Q8TBJ5 459 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 FBXO25Q8TCJ0 367 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 PTPN22Q9Y2R2 807 aa18.39■□□□□ 0.53
RRP1-202ENST00000471909 CAND2O75155 1236 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 RAP1GAPP47736 663 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 DUSP28Q4G0W2 176 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 C1orf54Q8WWF1 131 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.38■□□□□ 0.53
RRP1-202ENST00000471909 MMP3P08254 477 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 FKBP1BP68106 108 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 WDR72Q3MJ13 1102 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 SGO2Q562F6 1265 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 TMEM35BQ8NCS4 154 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 CXorf38Q8TB03 319 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 TINF2Q9BSI4 451 aa18.38■□□□□ 0.53
RRP1-202ENST00000471909 TCRBV5S1A1TA0A578 114 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 CCT8L1PA6NM43 557 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ADCY6O43306 1168 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 PSTPIP1O43586 416 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 CDH8P55286 799 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 TNFAIP2Q03169 654 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ACVR2BQ13705 512 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 E2F5Q15329 346 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 GRIK4Q16099 956 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 RHOT1Q8IXI2 618 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 NLRP7Q8WX94 980 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 RUNDC3BQ96NL0 473 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
RRP1-202ENST00000471909 PCDHGC3Q9UN70 934 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 USTQ9Y2C2 406 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ANK1P16157 1881 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 TMEM191CA6NGB0 347 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 MGRN1O60291 552 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ITGB3P05106 788 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 CALB1P05937 261 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 HOXD8P13378 290 aaPredicted RBP18.37■□□□□ 0.53
RRP1-202ENST00000471909 CHN1P15882 459 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 CDH5P33151 784 aaPredicted RBP18.37■□□□□ 0.53
RRP1-202ENST00000471909 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 SLC10A6Q3KNW5 377 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 PLEKHH3Q7Z736 793 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 SELENOSQ9BQE4 189 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 BCO2Q9BYV7 579 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ZNF518BQ9C0D4 1074 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 ABHD16BQ9H3Z7 469 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 CHST7Q9NS84 486 aa18.37■□□□□ 0.53
RRP1-202ENST00000471909 EIF4BP23588 611 aaKnown RBP18.36■□□□□ 0.53
RRP1-202ENST00000471909 ZNF667Q5HYK9 610 aa18.36■□□□□ 0.53
RRP1-202ENST00000471909 KIAA0319LQ8IZA0 1049 aa18.36■□□□□ 0.53
RRP1-202ENST00000471909 OR6J1Q8NGC5 347 aa18.36■□□□□ 0.53
RRP1-202ENST00000471909 ATG4AQ8WYN0 398 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms