RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 BMP15O95972 392 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 LMNAP02545 664 aaKnown RBP8.72□□□□□ -1.01
USP48-207ENST00000471752 ITGB3P05106 788 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 HAPLN1P10915 354 aaPredicted RBP8.72□□□□□ -1.01
USP48-207ENST00000471752 PSMC3P17980 439 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 CYP2F1P24903 491 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 GABRR2P28476 465 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 EPHB3P54753 998 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 SRSF5Q13243 272 aaKnown RBP8.72□□□□□ -1.01
USP48-207ENST00000471752 PLD1Q13393 1074 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 MYBPC2Q14324 1141 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 LPAL2Q16609 132 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 GPR158Q5T848 1215 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 TXNDC8Q6A555 127 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 TRIM68Q6AZZ1 485 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 Q6ZS52 159 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 CSGALNACT2Q8N6G5 542 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 RDH13Q8NBN7 331 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 PLEKHO2Q8TD55 490 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 PSMG2Q969U7 264 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 RMDN1Q96DB5 314 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 SHDQ96IW2 340 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 ACCSQ96QU6 501 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 SLC22A12Q96S37 553 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 CYP2S1Q96SQ9 504 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 PKMYT1Q99640 499 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 PI4K2AQ9BTU6 479 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 IRF2BPLQ9H1B7 796 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 BLZF1Q9H2G9 400 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 SLITRK6Q9H5Y7 841 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 ASB7Q9H672 318 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 FBRSL1Q9HCM7 1045 aaKnown RBP8.72□□□□□ -1.01
USP48-207ENST00000471752 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
USP48-207ENST00000471752 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 C2CD2Q9Y426 696 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 PIAS3Q9Y6X2 628 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 CEP295Q9C0D2 2601 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 ANK1P16157 1881 aa8.71□□□□□ -1.01
USP48-207ENST00000471752 PDCD11Q14690 1871 aaKnown RBP8.71□□□□□ -1.01
USP48-207ENST00000471752 MYBPHLA2RUH7 354 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 K7ELQ4 463 aaPredicted RBP8.71□□□□□ -1.02
USP48-207ENST00000471752 CLIC2O15247 247 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 SPTLC2O15270 562 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 TGFB1I1O43294 461 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 TADA3O75528 432 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
USP48-207ENST00000471752 F11P03951 625 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 CHRNB1P11230 501 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ODC1P11926 461 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 TGM1P22735 817 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 STAT6P42226 847 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ALDH1A3P47895 512 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 TAF6P49848 677 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 SATB1Q01826 763 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 SOWAHAQ2M3V2 549 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 MGAT5BQ3V5L5 792 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 SLFN12LQ6IEE8 588 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ZNF852Q6ZMS4 543 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 BRSK2Q8IWQ3 736 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 CD302Q8IX05 232 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 NELL1Q92832 810 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 DHX58Q96C10 678 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
USP48-207ENST00000471752 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 MTMR12Q9C0I1 747 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 TMEM30AQ9NV96 361 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 KBTBD4Q9NVX7 518 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ABI2Q9NYB9 513 aaPredicted RBP8.71□□□□□ -1.02
USP48-207ENST00000471752 STK17AQ9UEE5 414 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 GTF3C4Q9UKN8 822 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 DERAQ9Y315 318 aa8.71□□□□□ -1.02
USP48-207ENST00000471752 ZNF263O14978 683 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 LAMTOR5O43504 91 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 EXTL3O43909 919 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PDGFRBP09619 1106 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 ARSAP15289 507 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 GAP43P17677 238 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PDCP20941 246 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PXNP49023 591 aaPredicted RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 CASP4P49662 377 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 USP46P62068 366 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PSMC1P62191 440 aaKnown RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 ZXDBP98169 803 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PFKPQ01813 784 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 BFSP1Q12934 665 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 CUL4BQ13620 913 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PON2Q15165 354 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 STK38Q15208 465 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 KYAT1Q16773 422 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 CCDC73Q6ZRK6 1079 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 EPM2AIP1Q7L775 607 aaPredicted RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 LIMS2Q7Z4I7 341 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 NELFCDQ8IXH7 590 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 SYCP3Q8IZU3 236 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 ELMOD1Q8N336 334 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms