RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CLEC16AQ2KHT3 1053 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 JADE1Q6IE81 842 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 MTERF4Q7Z6M4 381 aaKnown RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF598Q86UK7 904 aaKnown RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 UBR7Q8N806 425 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 RBBP8NLQ8NC74 664 aaPredicted RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 SP7Q8TDD2 431 aaPredicted RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 ELMO3Q96BJ8 720 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 TSPAN18Q96SJ8 248 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 XYLT2Q9H1B5 865 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 FAM124BQ9H5Z6 455 aaPredicted RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 RNF19AQ9NV58 838 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 COL4A6Q14031 1691 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 CES2O00748 559 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 SRGAP2O75044 1071 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 NPTXRO95502 500 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 NFICP08651 508 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 P4HA1P13674 534 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 YARSP54577 528 aaKnown RBP18.61■□□□□ 0.57
HSPG2-208ENST00000471322 CLLU1OSQ5K130 101 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 FIBCD1Q8N539 461 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 GUCD1Q96NT3 240 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 TRIM6Q9C030 488 aaPredicted RBP18.61■□□□□ 0.57
HSPG2-208ENST00000471322 PDCL3Q9H2J4 239 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 NXF3Q9H4D5 531 aaKnown RBP18.61■□□□□ 0.57
HSPG2-208ENST00000471322 VRTNQ9H8Y1 702 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 ACP6Q9NPH0 428 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 ITGA11Q9UKX5 1188 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 INPP5FQ9Y2H2 1132 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 MRPL42Q9Y6G3 142 aaKnown RBP18.61■□□□□ 0.57
HSPG2-208ENST00000471322 VCANP13611 3396 aa18.61■□□□□ 0.57
HSPG2-208ENST00000471322 FTCDO95954 541 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 GNA15P30679 374 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 PAFAH1B1P43034 410 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 AFF1P51825 1210 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF132P52740 706 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 RBP5P82980 135 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 ITIH3Q06033 890 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF667Q5HYK9 610 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TEX35Q5T0J7 233 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 DAAM2Q86T65 1068 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 DNAAF5Q86Y56 855 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CREG2Q8IUH2 290 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 C1orf127Q8N9H9 656 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 SMG8Q8ND04 991 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 MYLIPQ8WY64 445 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 ELAC1Q9H777 363 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 IPPQ9Y573 584 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 MTA2O94776 668 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 STAU1O95793 577 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 EOMESO95936 686 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TUBBP07437 444 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 KRT19P08727 400 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 MYBL1P10243 752 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 SPOUT1Q5T280 376 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CCDC181Q5TID7 509 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF572Q7Z3I7 529 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 PEX26Q7Z412 305 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TTC39CQ8N584 583 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 PBKQ96KB5 322 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CAPZA3Q96KX2 299 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CASD1Q96PB1 797 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TGS1Q96RS0 853 aaKnown RBP18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TRAIPQ9BWF2 469 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CYP3A43Q9HB55 503 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CISHQ9NSE2 258 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 CTTNBP2NLQ9P2B4 639 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 UVRAGQ9P2Y5 699 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 SIX4Q9UIU6 781 aa18.6■□□□□ 0.57
HSPG2-208ENST00000471322 TMEM265A0A087WTH1 108 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 NCK2O43639 380 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 CSPG5O95196 566 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 CYP1A2P05177 515 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 UNGP13051 313 aaPredicted RBP18.59■□□□□ 0.57
HSPG2-208ENST00000471322 AKAP5P24588 427 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 RAB27AP51159 221 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 CFAP221Q4G0U5 840 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 AGMOQ6ZNB7 445 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 GDPD5Q8WTR4 605 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 ARHGEF26Q96DR7 871 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 DPP3Q9NY33 737 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 AMFRQ9UKV5 643 aa18.59■□□□□ 0.57
HSPG2-208ENST00000471322 MEFVO15553 781 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF623O75123 536 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 KIF4AO95239 1232 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 CYP1A1P04798 512 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ITGB3P05106 788 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 LINC00271P0C7V0 271 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 SKIP12755 728 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 PBX3P40426 434 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ASPAP45381 313 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.56
HSPG2-208ENST00000471322 KIF12Q96FN5 646 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms