RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C1QL1O75973 258 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 PF4V1P10720 104 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 NKX6-1P78426 367 aaPredicted RBP7.08□□□□□ -1.28
CCDC39-202ENST00000471307 SLC30A10Q6XR72 485 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 TSHZ1Q6ZSZ6 1077 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 USP37Q86T82 979 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 ARHGEF25Q86VW2 580 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 MTFMTQ96DP5 389 aaKnown RBP7.08□□□□□ -1.28
CCDC39-202ENST00000471307 C1GALT1C1Q96EU7 318 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 CAMKK2Q96RR4 588 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 NELL2Q99435 816 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
CCDC39-202ENST00000471307 ARPP21Q9UBL0 812 aaPredicted RBP7.08□□□□□ -1.28
CCDC39-202ENST00000471307 AGAP1Q9UPQ3 857 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 RAD54BQ9Y620 910 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 CEP164Q9UPV0 1460 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 KAT6AQ92794 2004 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 OFD1O75665 1012 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 KIF20AO95235 890 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 CHRM2P08172 466 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PDGFRBP09619 1106 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PHKA1P46020 1223 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 HNRNPMP52272 730 aaKnown RBP eCLIP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 IGBP1P78318 339 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PIN1Q13526 163 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PLS1Q14651 629 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 CCDC157Q569K6 752 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 COLEC12Q5KU26 742 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 FAM160B1Q5W0V3 765 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PPP1R3BQ86XI6 285 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 SLC35A4Q96G79 324 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 PUS7Q96PZ0 661 aaKnown RBP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 TPSD1Q9BZJ3 242 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 DDX56Q9NY93 547 aaKnown RBP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-202ENST00000471307 ABCC8Q09428 1581 aa7.07□□□□□ -1.28
CCDC39-202ENST00000471307 ARHGEF17Q96PE2 2063 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 CT47B1P0C2W7 299 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 PIM1P11309 404 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 TTF1Q15361 905 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 AKNAD1Q5T1N1 836 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 TEDDM1Q5T9Z0 273 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 SFRP4Q6FHJ7 346 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-202ENST00000471307 FAM109AQ8N4B1 249 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 SARAFQ96BY9 339 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
CCDC39-202ENST00000471307 ADGRA2Q96PE1 1338 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 H3BUI4 141 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 URI1O94763 535 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-202ENST00000471307 GPD1P21695 349 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 TOB1P50616 345 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-202ENST00000471307 MCL1Q07820 350 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 RBM20Q5T481 1227 aaKnown RBP7.05□□□□□ -1.28
CCDC39-202ENST00000471307 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 FAM136AQ96C01 138 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 AIFM3Q96NN9 605 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 RHOBTB2Q9BYZ6 727 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 AMBRA1Q9C0C7 1298 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 SLC12A5Q9H2X9 1139 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 SMOC2Q9H3U7 446 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
CCDC39-202ENST00000471307 EHD3Q9NZN3 535 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 STXBP5LQ9Y2K9 1186 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 PCDHA1Q9Y5I3 950 aa7.05□□□□□ -1.28
CCDC39-202ENST00000471307 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 KIF21AQ7Z4S6 1674 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 M0QYG6 137 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 AHSGP02765 367 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 CD6P30203 668 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 GCLCP48506 637 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-202ENST00000471307 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 ZNF384Q8TF68 577 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 STAG1Q8WVM7 1258 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 ACTRT3Q9BYD9 372 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 MRPS18AQ9NVS2 196 aaKnown RBP7.04□□□□□ -1.28
CCDC39-202ENST00000471307 ASB6Q9NWX5 421 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 TOP2BQ02880 1626 aa7.04□□□□□ -1.28
CCDC39-202ENST00000471307 LINC00473A8K010 186 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 VWC2LB2RUY7 222 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 VPS4BO75351 444 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 NXPH3O95157 252 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 TTLL1O95922 423 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 EPHB1P54762 984 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 EXOSC9Q06265 439 aaKnown RBP7.03□□□□□ -1.28
CCDC39-202ENST00000471307 BMPR2Q13873 1038 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 IFIT1BQ5T764 474 aaKnown RBP7.03□□□□□ -1.28
CCDC39-202ENST00000471307 PTF1AQ7RTS3 328 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 FBXO41Q8TF61 875 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 ATRIPQ8WXE1 791 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 RFKQ969G6 155 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 FKBP10Q96AY3 582 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 MOGAT1Q96PD6 335 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 CGRRF1Q99675 332 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 IL17RBQ9NRM6 502 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 PLEKHM1Q9Y4G2 1056 aa7.03□□□□□ -1.28
CCDC39-202ENST00000471307 CUX1P39880 1505 aa7.02□□□□□ -1.29
CCDC39-202ENST00000471307 BIVM-ERCC5R4GMW8 1640 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms