RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 MFSD5Q6N075 450 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 FBXO42Q6P3S6 717 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 MICALCLQ6ZW33 695 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 PNMA8AQ86V59 439 aaPredicted RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 PPP1R3BQ86XI6 285 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 CHPFQ8IZ52 775 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 KIAA0319LQ8IZA0 1049 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 PQLC1Q8N2U9 271 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 ZBTB34Q8NCN2 500 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 MDGA1Q8NFP4 955 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 CPT1CQ8TCG5 803 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 SSH1Q8WYL5 1049 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 GCDHQ92947 438 aaPredicted RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 MVB12AQ96EY5 273 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 LRGUKQ96M69 825 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 NUP88Q99567 741 aaPredicted RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 VKORC1Q9BQB6 163 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 POLR3GLQ9BT43 218 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 C1orf43Q9BWL3 253 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF768Q9H5H4 540 aaKnown RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 AS3MTQ9HBK9 375 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 OBP2AQ9NY56 170 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 AJAP1Q9UKB5 411 aaPredicted RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 SORCS3Q9UPU3 1222 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 MYBBP1AQ9BQG0 1328 aaKnown RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 TNS3Q68CZ2 1445 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 KNDC1Q76NI1 1749 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 NALCNQ8IZF0 1738 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 NWD2Q9ULI1 1742 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 MARF1Q9Y4F3 1742 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CENPVL1A0A0U1RR11 272 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 AP1G1O43747 822 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 MFAP3LO75121 409 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 IPO13O94829 963 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 SLC5A1P13866 664 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 MTHFD2P13995 350 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 AKAP5P24588 427 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CRHR1P34998 444 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 ZEB1P37275 1124 aaPredicted RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 AGFG1P52594 562 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 HK3P52790 923 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 BMT2Q1RMZ1 405 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 KHDC1Q4VXA5 237 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 FAM102AQ5T9C2 384 aaPredicted RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CHST15Q7LFX5 561 aaPredicted RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 PLXDC1Q8IUK5 500 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 KCNH5Q8NCM2 988 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 RNF169Q8NCN4 708 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CCHCR1Q8TD31 782 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF480Q8WV37 535 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 MAML1Q92585 1016 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 DDX17Q92841 729 aaKnown RBP3.34□□□□□ -1.87
UBXN4-206ENST00000470687 MRGPRX1Q96LB2 322 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CGRRF1Q99675 332 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 BHMT2Q9H2M3 363 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 PRDM11Q9NQV5 511 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 KCNG1Q9UIX4 513 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 FRMD4BQ9Y2L6 1034 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 CHST2Q9Y4C5 530 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 SPATA31A5Q5VU36 1347 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 SPATA31A7Q8IWB4 1347 aa3.34□□□□□ -1.87
UBXN4-206ENST00000470687 RGS12O14924 1447 aa3.34□□□□□ -1.88
UBXN4-206ENST00000470687 TBKBP1A7MCY6 615 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 VSTM5A8MXK1 200 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 TRIM24O15164 1050 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 NRP2O60462 931 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 UBXN7O94888 489 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 SNUPNO95149 360 aaKnown RBP3.33□□□□□ -1.88
UBXN4-206ENST00000470687 MATN4O95460 622 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 LAG3P18627 525 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 DDCP20711 480 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 MALP21145 153 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 FLT3LGP49771 235 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 GZMKP49863 264 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 CDC42EP1Q00587 391 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 APBA1Q02410 837 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 SCAPQ12770 1279 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 GBX1Q14549 363 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 UAP1L1Q3KQV9 507 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 DCAF17Q5H9S7 520 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-206ENST00000470687 OTUD7BQ6GQQ9 843 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 TMPRSS9Q7Z410 1059 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
UBXN4-206ENST00000470687 RHOT1Q8IXI2 618 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 MYO1HQ8N1T3 1032 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 TCP11L2Q8N4U5 519 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 SUPT20HQ8NEM7 779 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 CDK19Q9BWU1 502 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 SERHL2Q9H4I8 314 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 RSAD1Q9HA92 442 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 ALG13Q9NP73 1137 aaKnown RBP3.33□□□□□ -1.88
UBXN4-206ENST00000470687 FNIP2Q9P278 1114 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 RCAN3Q9UKA8 241 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 POLR3AO14802 1390 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-206ENST00000470687 CPDO75976 1380 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 DISP2A7MBM2 1401 aa3.33□□□□□ -1.88
UBXN4-206ENST00000470687 RALGAPBQ86X10 1494 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms