RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 SMG9Q9H0W8 520 aaKnown RBP17.48■□□□□ 0.39
SNAP47-206ENST00000470038 THG1LQ9NWX6 298 aaKnown RBP17.48■□□□□ 0.39
SNAP47-206ENST00000470038 ABI2Q9NYB9 513 aaPredicted RBP17.48■□□□□ 0.39
SNAP47-206ENST00000470038 SCN1AP35498 2009 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 DDIT3P35638 169 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 WDR44Q5JSH3 913 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 DYMQ7RTS9 669 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.47■□□□□ 0.39
SNAP47-206ENST00000470038 LRRTM3Q86VH5 581 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 SPPL2BQ8TCT7 592 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 C2orf15Q8WU43 125 aaKnown RBP17.47■□□□□ 0.39
SNAP47-206ENST00000470038 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 IL21Q9HBE4 155 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.47■□□□□ 0.39
SNAP47-206ENST00000470038 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
SNAP47-206ENST00000470038 ANK1P16157 1881 aa17.47■□□□□ 0.39
SNAP47-206ENST00000470038 EPG5Q9HCE0 2579 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 SDK1Q7Z5N4 2213 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 K7ESF4 209 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 PAPSS2O95340 614 aaPredicted RBP17.46■□□□□ 0.39
SNAP47-206ENST00000470038 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
SNAP47-206ENST00000470038 WEE1P30291 646 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 CNR2P34972 360 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 MCM2P49736 904 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 SMARCB1Q12824 385 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 ITPRIPL2Q3MIP1 535 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 CEP68Q76N32 757 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 ZNF720Q7Z2F6 126 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 DCP1BQ8IZD4 617 aaKnown RBP17.46■□□□□ 0.39
SNAP47-206ENST00000470038 SLC46A2Q9BY10 475 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 CCSER1Q9C0I3 900 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 ST6GALNAC4Q9H4F1 302 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 GKN1Q9NS71 199 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 C2orf42Q9NWW7 574 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 STYXL1Q9Y6J8 313 aa17.46■□□□□ 0.39
SNAP47-206ENST00000470038 ACACBO00763 2458 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 KPNA7A9QM74 516 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 LRP3O75074 770 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 AVPR1AP37288 418 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 CCINQ13939 588 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 POSTNQ15063 836 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 PTPAQ15257 358 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 SV2CQ496J9 727 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 CRELD2Q6UXH1 353 aaPredicted RBP17.45■□□□□ 0.38
SNAP47-206ENST00000470038 EFCAB13Q8IY85 973 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 CMTM8Q8IZV2 173 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 SYNPOQ8N3V7 929 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 MAB21L3Q8N8X9 362 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
SNAP47-206ENST00000470038 SEMA4GQ9NTN9 838 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 PCDHB5Q9Y5E4 795 aa17.45■□□□□ 0.38
SNAP47-206ENST00000470038 TSC2P49815 1807 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 CACNA1BQ00975 2339 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 IL18RAPO95256 599 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 ADSSP30520 456 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 HOXC13P31276 330 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 TFAMQ00059 246 aaKnown RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 TSPY1Q01534 308 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 POU5F1Q01860 360 aaKnown RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 BFSP1Q12934 665 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 HVCN1Q96D96 273 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 FAM213AQ9BRX8 229 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 PI4K2AQ9BTU6 479 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 MRPL44Q9H9J2 332 aaKnown RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 TBC1D7Q9P0N9 293 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 CCDC39Q9UFE4 941 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 ZMYM5Q9UJ78 669 aa17.44■□□□□ 0.38
SNAP47-206ENST00000470038 MAGED2Q9UNF1 606 aaPredicted RBP17.44■□□□□ 0.38
SNAP47-206ENST00000470038 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
SNAP47-206ENST00000470038 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
SNAP47-206ENST00000470038 PNPLA4P41247 253 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 NLRP12P59046 1061 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 PRR23CQ6ZRP0 262 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 NT5DC4Q86YG4 428 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 STKLD1Q8NE28 680 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 CNTNAP3BQ96NU0 1288 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 CNTNAP3Q9BZ76 1288 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 TMLHEQ9NVH6 421 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 EXOC7Q9UPT5 735 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 CCL26Q9Y258 94 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 TCHHQ07283 1943 aa17.43■□□□□ 0.38
SNAP47-206ENST00000470038 EXTL3O43909 919 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 F11P03951 625 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 CSH1P0DML2 217 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 CSH2P0DML3 217 aa17.42■□□□□ 0.38
SNAP47-206ENST00000470038 HMGA1P17096 107 aaKnown RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 DDX6P26196 483 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
SNAP47-206ENST00000470038 GPR15P49685 360 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms