RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 OXCT2Q9BYC2 517 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 ACP6Q9NPH0 428 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 EPN1Q9Y6I3 576 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 PTPRDP23468 1912 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 EIF3CLB5ME19 914 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 I3L4J1 428 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.64
THBS3-206ENST00000469769 TLL1O43897 1013 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 GZMAP12544 262 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 KRT5P13647 590 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 CD58P19256 250 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 PCSK1P29120 753 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 GNA15P30679 374 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 EIF4A3P38919 411 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 FMO1Q01740 532 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 STILQ15468 1287 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 SLC18A3Q16572 532 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 DDX53Q86TM3 631 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 OR6B3Q8NGW1 331 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 HASPINQ8TF76 798 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 TNIP3Q96KP6 325 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 RNPC3Q96LT9 517 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 EIF3CQ99613 913 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 LHX5Q9H2C1 402 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 KCND1Q9NSA2 647 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 DDX43Q9NXZ2 648 aaKnown RBP11.06□□□□□ -0.64
THBS3-206ENST00000469769 SPG21Q9NZD8 308 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 CDH9Q9ULB4 789 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 RWDD3Q9Y3V2 267 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
THBS3-206ENST00000469769 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 A0A087X0T9 212 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 LINC01553A4QN01 128 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 SOWAHDA6NJG2 315 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 A8MXQ7 604 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 O00370 1275 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ZNF263O14978 683 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 LILRB3O75022 631 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 NDUFA10O95299 355 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 SOD2P04179 222 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 CYP1A1P04798 512 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 RB1P06400 928 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 FAM228BP0C875 321 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 UNGP13051 313 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 TKTP29401 623 aaKnown RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 BMPR1AP36894 532 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 PBX3P40426 434 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 USP8P40818 1118 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 PDE6CP51160 858 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 DSG1Q02413 1049 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ARID5AQ03989 594 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 YWHAHQ04917 246 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 ZNF394Q53GI3 561 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 FAM171A1Q5VUB5 890 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 LCLAT1Q6UWP7 414 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 TRIM72Q6ZMU5 477 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ZNF662Q6ZS27 426 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 METTL23Q86XA0 190 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 B3GALNT2Q8NCR0 500 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 PIK3R5Q8WYR1 880 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 CCDC42Q96M95 316 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ZNF830Q96NB3 372 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 PCDHB18PQ96TA0 734 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 HERC2P3Q9BVR0 1158 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 UBE2OQ9C0C9 1292 aaKnown RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 SNX25Q9H3E2 840 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
THBS3-206ENST00000469769 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 PCDHB12Q9Y5F1 795 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 TIMM13Q9Y5L4 95 aaPredicted RBP11.05□□□□□ -0.64
THBS3-206ENST00000469769 BACE2Q9Y5Z0 518 aa11.05□□□□□ -0.64
THBS3-206ENST00000469769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
THBS3-206ENST00000469769 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
THBS3-206ENST00000469769 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
THBS3-206ENST00000469769 OR6C75A6NL08 312 aa11.04□□□□□ -0.64
THBS3-206ENST00000469769 HCRTO43612 131 aa11.04□□□□□ -0.64
THBS3-206ENST00000469769 NRDCO43847 1150 aa11.04□□□□□ -0.64
THBS3-206ENST00000469769 MMEP08473 750 aa11.04□□□□□ -0.64
THBS3-206ENST00000469769 PTPN1P18031 435 aaKnown RBP11.04□□□□□ -0.64
THBS3-206ENST00000469769 CYLC1P35663 651 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms