RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
TRAPPC3-206ENST00000469757 CDH22Q9UJ99 828 aa8.89□□□□□ -0.99
TRAPPC3-206ENST00000469757 YIPF1Q9Y548 306 aa8.89□□□□□ -0.99
TRAPPC3-206ENST00000469757 NME7Q9Y5B8 376 aa8.89□□□□□ -0.99
TRAPPC3-206ENST00000469757 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 CCDC195A0A1B0GUA6 201 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 P4HA2O15460 535 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 N4BP1O75113 896 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 PHACTR2O75167 634 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 XYLBO75191 536 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 OR4Q2P0C623 313 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 SPATA31D3P0C874 917 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 P4HA1P13674 534 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 PTMSP20962 102 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 NLRP12P59046 1061 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 MYL7Q01449 175 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 TSPY1Q01534 308 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 PLD1Q13393 1074 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 NFE2Q16621 373 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 SGSM1Q2NKQ1 1148 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 KLHL40Q2TBA0 621 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 WDR72Q3MJ13 1102 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 ZNF667Q5HYK9 610 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 PPM1LQ5SGD2 360 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 ATAT1Q5SQI0 421 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 FAM171BQ6P995 826 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 TMC5Q6UXY8 1006 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 SPATA31D4Q6ZUB0 917 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 IRF2BP1Q8IU81 584 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 DCP1BQ8IZD4 617 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 THEM5Q8N1Q8 247 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 TTC9BQ8N6N2 239 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 SPPL2BQ8TCT7 592 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 SMG7Q92540 1137 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 COL25A1Q9BXS0 654 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 DNAJC25Q9H1X3 360 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 APOBEC3GQ9HC16 384 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 DDX43Q9NXZ2 648 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 TMEM63CQ9P1W3 806 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 R3HCC1Q9Y3T6 440 aaKnown RBP8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 DOCK8Q8NF50 2099 aa8.88□□□□□ -0.99
TRAPPC3-206ENST00000469757 OBSL1O75147 1896 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 KIF26AQ9ULI4 1882 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 PRRG1O14668 218 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 MICAL2O94851 1124 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 FGFR1OPO95684 399 aaKnown RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 MAGEA11P43364 429 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 FMO5P49326 533 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 STX17P56962 302 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 MAPRE1Q15691 268 aaKnown RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 STX1AQ16623 288 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 SLC39A12Q504Y0 691 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 DCAF17Q5H9S7 520 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 ZDHHC14Q8IZN3 488 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 ATAD1Q8NBU5 361 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 LEMD2Q8NC56 503 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 SEMA4DQ92854 862 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 CNOT6LQ96LI5 555 aaKnown RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 CEP295NLQ96MC4 621 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 SYT15Q9BQS2 421 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 MRPL45Q9BRJ2 306 aaKnown RBP8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 SDCBP2Q9H190 292 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 THAP9Q9H5L6 903 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 CYP3A43Q9HB55 503 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 CYP4F11Q9HBI6 524 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 CRTAC1Q9NQ79 661 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 TMLHEQ9NVH6 421 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 EPS15L1Q9UBC2 864 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 POLIQ9UNA4 740 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 NR2E1Q9Y466 385 aa8.87□□□□□ -0.99
TRAPPC3-206ENST00000469757 COL4A2P08572 1712 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 NUP210Q8TEM1 1887 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 GTPBP10A4D1E9 387 aaKnown RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 SPDYE4A6NLX3 237 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 HCRTO43612 131 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 CILPO75339 1184 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 LRG1P02750 347 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 WEE2P0C1S8 567 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 CCDC192P0DO97 292 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 HAPLN1P10915 354 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 PRKCSHP14314 528 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 ATF6P18850 670 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 ACAT1P24752 427 aaKnown RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 TUFMP49411 452 aaKnown RBP8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 DUSP4Q13115 394 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 CCDC142Q17RM4 750 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 PRSS36Q5K4E3 855 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 CDKAL1Q5VV42 579 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 TCERG1LQ5VWI1 586 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 VSTM1Q6UX27 236 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 C4orf50Q6ZRC1 276 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 UNC93AQ86WB7 457 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 TMC8Q8IU68 726 aa8.86□□□□□ -0.99
TRAPPC3-206ENST00000469757 TTC39CQ8N584 583 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms