RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ADGRG2Q8IZP9 1017 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 TP53I13Q8NBR0 393 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 WDR48Q8TAF3 677 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 FERMT2Q96AC1 680 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 COA7Q96BR5 231 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 KCNG1Q9UIX4 513 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 THSD7BQ9C0I4 1608 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 ZMYM6O95789 1325 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 MYO5AQ9Y4I1 1855 aaKnown RBP7.21□□□□□ -1.25
PTCD3-208ENST00000469585 MYH8P13535 1937 aa7.21□□□□□ -1.25
PTCD3-208ENST00000469585 A0A0D9SFI3 127 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 A0A1B0GTL3 188 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 DDX3XO00571 662 aaKnown RBP eCLIP7.21□□□□□ -1.26
PTCD3-208ENST00000469585 ENPP1P22413 925 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 SHMT1P34896 483 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 TXKP42681 527 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 PRMT2P55345 433 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 TFAP4Q01664 338 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 SEPT2Q15019 361 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 WDR72Q3MJ13 1102 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 PITRM1Q5JRX3 1037 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 WDR78Q5VTH9 848 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 GRAMD4Q6IC98 578 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 CCDC129Q6ZRS4 1044 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 BCL6BQ8N143 479 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-208ENST00000469585 CARFQ8N187 725 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 MB21D1Q8N884 522 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 NUDT10Q8NFP7 164 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 BRI3BPQ8WY22 251 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 DYNLL2Q96FJ2 89 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 NUDT11Q96G61 164 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 SEC62Q99442 399 aaKnown RBP7.21□□□□□ -1.26
PTCD3-208ENST00000469585 KIAA1683Q9H0B3 1180 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 MTG2Q9H4K7 406 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 PRDM12Q9H4Q4 367 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 KCMF1Q9P0J7 381 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 SYNPO2Q9UMS6 1093 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 STX8Q9UNK0 236 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 NUMBLQ9Y6R0 609 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 TNKSO95271 1327 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 MYPNQ86TC9 1320 aa7.21□□□□□ -1.26
PTCD3-208ENST00000469585 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 OTOFQ9HC10 1997 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 A0A0A6YYJ9 748 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 WDR46O15213 610 aaKnown RBP7.2□□□□□ -1.26
PTCD3-208ENST00000469585 OPHN1O60890 802 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 H2AFYO75367 372 aaKnown RBP7.2□□□□□ -1.26
PTCD3-208ENST00000469585 FLOT1O75955 427 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 FGAP02671 866 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CYP2D6P10635 497 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 COPB2P35606 906 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 ADCY8P40145 1251 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
PTCD3-208ENST00000469585 GABPAQ06546 454 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 TOP3AQ13472 1001 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-208ENST00000469585 KRT32Q14532 448 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CCDC62Q6P9F0 684 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 SYNE3Q6ZMZ3 975 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 SLC41A1Q8IVJ1 513 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 OR5AN1Q8NGI8 311 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 RAET1EQ8TD07 263 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CHURC1Q8WUH1 139 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CEP89Q96ST8 783 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 SMAD5Q99717 465 aaKnown RBP7.2□□□□□ -1.26
PTCD3-208ENST00000469585 SPATA25Q9BR10 227 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 KAT14Q9H8E8 782 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 L2HGDHQ9H9P8 463 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CLIP2Q9UDT6 1046 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 ANAPC4Q9UJX5 808 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 FBXO10Q9UK96 956 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 PNMA2Q9UL42 364 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 TRIM17Q9Y577 477 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 LAMB1P07942 1786 aa7.2□□□□□ -1.26
PTCD3-208ENST00000469585 CYP2D7A0A087X1C5 515 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 A0A0G2JNJ9 132 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 TNPO2O14787 897 aaKnown RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 ORC4O43929 436 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 NUAK1O60285 661 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 ZBED4O75132 1171 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 PRDM1O75626 825 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 MT-CO1P00395 513 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 AKR1B1P15121 316 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 CHMLP26374 656 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 MAPK4P31152 587 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 SLC1A4P43007 532 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 ANTXR2P58335 489 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 HAND2P61296 217 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 TRAF1Q13077 416 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 TRIM25Q14258 630 aaKnown RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 PLS1Q14651 629 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 COG2Q14746 738 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 FAM110CQ1W6H9 321 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms