RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 HNRNPCL1O60812 293 aaKnown RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PEX11AO75192 247 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 DCTN3O75935 186 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 LMNAP02545 664 aaKnown RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TPBGLP0DKB5 382 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CSF2RAP15509 400 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ACADSP16219 412 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CIITAP33076 1130 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MYL7Q01449 175 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 KCNA1Q09470 495 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PTK6Q13882 451 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 STAT4Q14765 748 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 GRIN2CQ14957 1233 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SYDE2Q5VT97 1194 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ANO7Q6IWH7 933 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 RINT1Q6NUQ1 792 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CEP128Q6ZU80 1094 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 STXBP4Q6ZWJ1 553 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 HS2ST1Q7LGA3 356 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CCDC25Q86WR0 208 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 EGFL6Q8IUX8 553 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TMEM174Q8WUU8 243 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SNF8Q96H20 258 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 RUSC1Q9BVN2 902 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MAF1Q9H063 256 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 UBN1Q9NPG3 1134 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 EURLQ9NYK6 297 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TRIM33Q9UPN9 1127 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 USP20Q9Y2K6 914 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 FRMD4BQ9Y2L6 1034 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TANC1Q9C0D5 1861 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 LRRD1A4D1F6 860 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 EME2A4GXA9 379 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MEIS1O00470 390 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MAPK13O15264 365 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SORBS3O60504 671 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ACSL3O95573 720 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 CYP1A2P05177 515 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 IVDP26440 423 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ALDH3A1P30838 453 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PEX19P40855 299 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ARHGAP4P98171 946 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ITGA7Q13683 1181 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MESDQ14696 234 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 RAB30Q15771 203 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 DUSP28Q4G0W2 176 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TTBK2Q6IQ55 1244 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SLC30A9Q6PML9 568 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 USP17L6PQ6QN14 398 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 RNF207Q6ZRF8 634 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ZNF365Q70YC5 407 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MFN1Q8IWA4 741 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 FBXO16Q8IX29 292 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 BBOF1Q8ND07 529 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ASAP3Q8TDY4 903 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 GRK7Q8WTQ7 553 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 ZFAND2BQ8WV99 257 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 LENG9Q96B70 501 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PBX4Q9BYU1 374 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 FOXP3Q9BZS1 431 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 MTIF3Q9H2K0 278 aaKnown RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 BHMT2Q9H2M3 363 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TLE6Q9H808 572 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 UVRAGQ9P2Y5 699 aa10.14□□□□□ -0.79
HDAC3-205ENST00000469550 NKX1-2Q9UD57 310 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-205ENST00000469550 TCRBV7S2A1N4TA0A589 114 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 FAM47DPA6NHR8 397 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 MEIS2O14770 477 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 DYNC1LI2O43237 492 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-205ENST00000469550 FAM13AO94988 1023 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 FOSP01100 380 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-205ENST00000469550 GH1P01241 217 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 ABHD2P08910 425 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 CYP2C18P33260 490 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 KCNJ1P48048 391 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 KRT17Q04695 432 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 CETN1Q12798 172 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 BFSP1Q12934 665 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 ARHGAP44Q17R89 818 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 TSNAXIP1Q2TAA8 658 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 NSMFQ6X4W1 530 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 ZNF720Q7Z2F6 126 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 VSIG1Q86XK7 387 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 FAM13CQ8NE31 585 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 GDAP1Q8TB36 358 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 LRRC37BQ96QE4 947 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 TRAIPQ9BWF2 469 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 MYLK2Q9H1R3 596 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms