RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 DSTYKQ6XUX3 929 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 EMC1Q8N766 993 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 ANKEF1Q9NU02 776 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 EME2A4GXA9 379 aaPredicted RBP12.73□□□□□ -0.37
VARS2-205ENST00000469358 TPBGLP0DKB5 382 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 BBS9Q3SYG4 887 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
VARS2-205ENST00000469358 C3orf62Q6ZUJ4 267 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
VARS2-205ENST00000469358 TTC7BQ86TV6 843 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 SAMD3Q8N6K7 520 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 FAM81BQ96LP2 452 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 PLCD4Q9BRC7 762 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 MRPL47Q9HD33 250 aaKnown RBP12.73□□□□□ -0.37
VARS2-205ENST00000469358 ZFP69BQ9UJL9 534 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 TMEM191CA6NGB0 347 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 EXTL3O43909 919 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
VARS2-205ENST00000469358 NR3C2P08235 984 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 GNAZP19086 355 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CPA2P48052 419 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 JAK3P52333 1124 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 KRT76Q01546 638 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 FSTL1Q12841 308 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 CAPRIN2Q6IMN6 1127 aaKnown RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
VARS2-205ENST00000469358 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 IGDCC3Q8IVU1 814 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 BBOF1Q8ND07 529 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 NTPCRQ9BSD7 190 aaKnown RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CYP26B1Q9NR63 512 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 CALB2P22676 271 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 NR1H3Q13133 447 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 USP37Q86T82 979 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 ACTL9Q8TC94 416 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 RAB3IPQ96QF0 476 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 PARVAQ9NVD7 372 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 AVILO75366 819 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 FAM155BO75949 473 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 TJP3O95049 919 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 IL1R2P27930 398 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 PCK1P35558 622 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 PTDSS1P48651 473 aaKnown RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 OTUD4Q01804 1114 aaKnown RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 PSMD6Q15008 389 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 OASLQ15646 514 aaKnown RBP12.72□□□□□ -0.37
VARS2-205ENST00000469358 HIF1AQ16665 826 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 KIAA0319LQ8IZA0 1049 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 PYROXD1Q8WU10 500 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 TRIM11Q96F44 468 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 ARMCX1Q9P291 453 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
VARS2-205ENST00000469358 hCG_1818297A0A087WSY0 165 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PIK3R2O00459 728 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 ALOX15BO15296 676 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 MAGEB2O15479 319 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.371e-9■■■□□ 17.8
VARS2-205ENST00000469358 TMEM63AO94886 807 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 ASNSP08243 561 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 ABHD2P08910 425 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 MMP8P22894 467 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
VARS2-205ENST00000469358 NCOA4Q13772 614 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 MDH1BQ5I0G3 518 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 NIPA1Q7RTP0 329 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 CLNKQ7Z7G1 428 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 STK32AQ8WU08 396 aa12.71□□□□□ -0.37
VARS2-205ENST00000469358 PAFAH2Q99487 392 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms