RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 MMP17Q9ULZ9 603 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 SLC27A5Q9Y2P5 690 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 CABIN1Q9Y6J0 2220 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 NOTCH2Q04721 2471 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
HDAC6-217ENST00000469223 CFHR1Q03591 330 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 TMPRSS7Q7RTY8 843 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 CPA6Q8N4T0 437 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
HDAC6-217ENST00000469223 APPL2Q8NEU8 664 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 FCRL3Q96P31 734 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-217ENST00000469223 SLC46A2Q9BY10 475 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 KCNMB3Q9NPA1 279 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 IGSF5Q9NSI5 407 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
HDAC6-217ENST00000469223 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 NBPF19A0A087WUL8 3843 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CAPN9O14815 690 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 GJB3O75712 270 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 REC8O95072 547 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CDC25CP30307 473 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 AVPR1AP37288 418 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 RCAN1P53805 252 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 NLRP5P59047 1200 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 AKAP17AQ02040 695 aaKnown RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 BFSP1Q12934 665 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CRY1Q16526 586 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 DEFB119Q8N690 84 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 CEP120Q8N960 986 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 C18orf25Q96B23 403 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 ZMAT2Q96NC0 199 aaKnown RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 C22orf23Q9BZE7 217 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC6-217ENST00000469223 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 TCHHQ07283 1943 aa13.78□□□□□ -0.2
HDAC6-217ENST00000469223 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.2
HDAC6-217ENST00000469223 MTMR11A4FU01 709 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 UTP20O75691 2785 aaKnown RBP13.77□□□□□ -0.21
HDAC6-217ENST00000469223 ALDH1A2O94788 518 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 SLC14A1Q13336 389 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 INF2Q27J81 1249 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 SPDYCQ5MJ68 293 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 FAM20AQ96MK3 541 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 ECT2Q9H8V3 914 aa13.77□□□□□ -0.21
HDAC6-217ENST00000469223 TIMM13Q9Y5L4 95 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-217ENST00000469223 NID2Q14112 1375 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 CCDC196A0A1B0GTZ2 297 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 FAM149AA5PLN7 773 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 ACKR2O00590 384 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 SYPP08247 313 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 NMT1P30419 496 aaKnown RBP13.76□□□□□ -0.21
HDAC6-217ENST00000469223 RARRES1P49788 294 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 OSTNP61366 133 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 RPL6Q02878 288 aaKnown RBP13.76□□□□□ -0.21
HDAC6-217ENST00000469223 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-217ENST00000469223 NBR1Q14596 966 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 GLRX5Q86SX6 157 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 MAB21L3Q8N8X9 362 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 HMGB4Q8WW32 186 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-217ENST00000469223 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 PCDHA4Q9UN74 947 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
HDAC6-217ENST00000469223 AP5Z1O43299 807 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 CBFA2T3O75081 653 aa13.75□□□□□ -0.21
HDAC6-217ENST00000469223 MARCKSP29966 332 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-217ENST00000469223 CDR1P51861 262 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms